Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm37283-201ENSMUST00000193111 1571 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 AC192333.5-201ENSMUST00000224620 2350 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm23133-201ENSMUST00000104255 135 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Mir669i-201ENSMUST00000117007 127 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm14891-201ENSMUST00000117378 596 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm13803-201ENSMUST00000117547 489 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm12370-201ENSMUST00000117809 604 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm14307-201ENSMUST00000118930 291 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm11653-201ENSMUST00000119992 1009 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm14787-201ENSMUST00000121236 388 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm14297-201ENSMUST00000129110 291 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm22755-201ENSMUST00000157143 100 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm6647-201ENSMUST00000170514 641 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm4076-201ENSMUST00000179230 965 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm29412-201ENSMUST00000185869 696 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm5334-201ENSMUST00000187472 720 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm8004-201ENSMUST00000187782 617 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm29335-201ENSMUST00000188361 459 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm29634-201ENSMUST00000188467 696 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm28699-201ENSMUST00000189193 696 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm28837-201ENSMUST00000190397 696 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm36928-201ENSMUST00000192466 694 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm37325-201ENSMUST00000194971 694 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm42958-201ENSMUST00000197595 318 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm43203-201ENSMUST00000200130 558 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm42584-201ENSMUST00000201404 220 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm4548-201ENSMUST00000208487 509 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm18562-201ENSMUST00000209949 915 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm45400-201ENSMUST00000211603 653 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm18774-201ENSMUST00000218269 601 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm2089-201ENSMUST00000218294 479 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 AC154532.2-201ENSMUST00000228947 598 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm22504-201ENSMUST00000082963 139 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 AC155298.3-201ENSMUST00000225307 3220 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm2065-201ENSMUST00000194697 2757 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Gm13058-201ENSMUST00000117097 1435 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Klf5-202ENSMUST00000226784 2852 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 CR974429.2-201ENSMUST00000221883 1696 ntBASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim47Q8C0E3 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Gm14197-201ENSMUST00000117480 1049 ntBASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Gm12717-201ENSMUST00000118427 983 ntBASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Gm12262-201ENSMUST00000119915 305 ntBASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Gm5255-201ENSMUST00000120125 642 ntBASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Gm14939-201ENSMUST00000120347 680 ntBASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Gm22882-201ENSMUST00000157749 124 ntBASIC8.17□□□□□ -1.1
Trim47Q8C0E3 Gm2855-201ENSMUST00000166765 456 ntBASIC8.17□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms