Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Tpmt-201ENSMUST00000021806 2708 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim35Q8C006 Fut10-203ENSMUST00000161502 3527 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim35Q8C006 Gm37607-201ENSMUST00000194925 2623 ntBASIC9.17□□□□□ -0.94
Trim35Q8C006 Polr1e-201ENSMUST00000029999 1724 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim35Q8C006 Zfp715-203ENSMUST00000107986 4184 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim35Q8C006 Irf2-201ENSMUST00000034041 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim35Q8C006 Lpin2-204ENSMUST00000129635 5640 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim35Q8C006 Zfp791-201ENSMUST00000098550 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim35Q8C006 Sp1-202ENSMUST00000163709 3134 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim35Q8C006 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim35Q8C006 Rimbp2-202ENSMUST00000196085 3732 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Trim35Q8C006 Parva-202ENSMUST00000106640 1465 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trim35Q8C006 Serpina3j-201ENSMUST00000109957 2155 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Trim35Q8C006 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trim35Q8C006 Gm37959-201ENSMUST00000191700 2897 ntBASIC9.16□□□□□ -0.94
Trim35Q8C006 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim35Q8C006 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Trim35Q8C006 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim35Q8C006 Apod-203ENSMUST00000130560 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim35Q8C006 Myadm-204ENSMUST00000203566 4028 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim35Q8C006 Uba1-202ENSMUST00000089217 4044 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim35Q8C006 Ece2-207ENSMUST00000079600 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim35Q8C006 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trim35Q8C006 Gm38043-201ENSMUST00000195501 5141 ntBASIC9.16□□□□□ -0.94
Trim35Q8C006 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Trim35Q8C006 Gm24889-201ENSMUST00000104388 132 ntBASIC9.16□□□□□ -0.94
Trim35Q8C006 Phyhd1-203ENSMUST00000113643 1195 ntTSL 5 BASIC9.16□□□□□ -0.94
Trim35Q8C006 Gm15320-201ENSMUST00000118085 364 ntBASIC9.16□□□□□ -0.94
Trim35Q8C006 Gm11489-201ENSMUST00000118342 499 ntBASIC9.16□□□□□ -0.94
Trim35Q8C006 Olfr122-201ENSMUST00000119082 993 ntBASIC9.16□□□□□ -0.94
Trim35Q8C006 Gm14856-201ENSMUST00000121548 613 ntBASIC9.16□□□□□ -0.94
Trim35Q8C006 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trim35Q8C006 Gm10319-202ENSMUST00000159439 846 ntBASIC9.16□□□□□ -0.94
Trim35Q8C006 Gm20319-201ENSMUST00000172522 771 ntTSL 2 BASIC9.16□□□□□ -0.94
Trim35Q8C006 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trim35Q8C006 Mir5114-201ENSMUST00000175574 61 ntBASIC9.16□□□□□ -0.94
Trim35Q8C006 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Trim35Q8C006 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Trim35Q8C006 1700034B16Rik-201ENSMUST00000180957 722 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trim35Q8C006 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC9.16□□□□□ -0.94
Trim35Q8C006 Gm45005-201ENSMUST00000206640 157 ntBASIC9.16□□□□□ -0.94
Trim35Q8C006 Gm45408-201ENSMUST00000211080 390 ntTSL 5 BASIC9.16□□□□□ -0.94
Trim35Q8C006 AC153968.1-201ENSMUST00000215584 334 ntBASIC9.16□□□□□ -0.94
Trim35Q8C006 AC124436.1-201ENSMUST00000217917 342 ntBASIC9.16□□□□□ -0.94
Trim35Q8C006 Gm46234-201ENSMUST00000218702 259 ntBASIC9.16□□□□□ -0.94
Trim35Q8C006 Gm6333-201ENSMUST00000218775 796 ntBASIC9.16□□□□□ -0.94
Trim35Q8C006 AC165249.1-203ENSMUST00000219976 392 ntTSL 2 BASIC9.16□□□□□ -0.94
Trim35Q8C006 AC155941.1-201ENSMUST00000220223 529 ntBASIC9.16□□□□□ -0.94
Trim35Q8C006 Gm40578-202ENSMUST00000221429 920 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trim35Q8C006 Gm18500-201ENSMUST00000223493 820 ntBASIC9.16□□□□□ -0.94
Trim35Q8C006 AC108416.3-201ENSMUST00000226148 557 ntBASIC9.16□□□□□ -0.94
Trim35Q8C006 AC101945.1-201ENSMUST00000226734 466 ntBASIC9.16□□□□□ -0.94
Trim35Q8C006 AC154589.1-201ENSMUST00000228694 604 ntBASIC9.16□□□□□ -0.94
Trim35Q8C006 Tex43-201ENSMUST00000035640 565 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim35Q8C006 4930542C16Rik-201ENSMUST00000062438 1090 ntTSL 2 BASIC9.16□□□□□ -0.94
Trim35Q8C006 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Trim35Q8C006 Gm23138-201ENSMUST00000083365 103 ntBASIC9.16□□□□□ -0.94
Trim35Q8C006 Katnb1-201ENSMUST00000034239 3777 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim35Q8C006 Ccdc77-202ENSMUST00000112703 1887 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Trim35Q8C006 Ank3-219ENSMUST00000182437 3113 ntTSL 5 BASIC9.16□□□□□ -0.94
Trim35Q8C006 Gja10-202ENSMUST00000219644 1857 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Trim35Q8C006 Gm43648-201ENSMUST00000197775 2485 ntBASIC9.16□□□□□ -0.94
Trim35Q8C006 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC9.16□□□□□ -0.94
Trim35Q8C006 Afap1l2-202ENSMUST00000118800 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim35Q8C006 Zkscan2-201ENSMUST00000042470 7831 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim35Q8C006 Akr1cl-206ENSMUST00000162800 1628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim35Q8C006 Rsrc1-203ENSMUST00000065074 3224 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim35Q8C006 Epb42-202ENSMUST00000102490 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim35Q8C006 Erich3-201ENSMUST00000051862 2034 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim35Q8C006 Gria1-204ENSMUST00000151045 5361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim35Q8C006 Bcas1-201ENSMUST00000013667 2916 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim35Q8C006 Ivl-201ENSMUST00000053107 1922 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.94
Trim35Q8C006 Gm12080-201ENSMUST00000119821 1883 ntBASIC9.15□□□□□ -0.94
Trim35Q8C006 Gm19666-201ENSMUST00000198176 1893 ntBASIC9.15□□□□□ -0.94
Trim35Q8C006 Srp54b-201ENSMUST00000164243 2317 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Trim35Q8C006 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Trim35Q8C006 Cpa4-201ENSMUST00000049251 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim35Q8C006 Gm20236-201ENSMUST00000193037 4540 ntBASIC9.15□□□□□ -0.94
Trim35Q8C006 Gm37094-201ENSMUST00000193352 4540 ntBASIC9.15□□□□□ -0.94
Trim35Q8C006 Htr1d-202ENSMUST00000117699 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim35Q8C006 Gm43872-201ENSMUST00000203218 2213 ntBASIC9.15□□□□□ -0.94
Trim35Q8C006 Gnl3l-202ENSMUST00000112691 4869 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim35Q8C006 Gnl3l-201ENSMUST00000026297 4865 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim35Q8C006 Ccdc15-201ENSMUST00000037275 3525 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim35Q8C006 Lrtm1-203ENSMUST00000224760 3060 ntBASIC9.15□□□□□ -0.94
Trim35Q8C006 AC162467.3-201ENSMUST00000219716 2172 ntBASIC9.15□□□□□ -0.94
Trim35Q8C006 Gm37642-201ENSMUST00000193166 1735 ntBASIC9.15□□□□□ -0.94
Trim35Q8C006 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trim35Q8C006 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC9.15□□□□□ -0.94
Trim35Q8C006 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC9.15□□□□□ -0.94
Trim35Q8C006 Gm14983-201ENSMUST00000121551 323 ntBASIC9.15□□□□□ -0.94
Trim35Q8C006 Gm13719-201ENSMUST00000122018 2111 ntBASIC9.15□□□□□ -0.94
Trim35Q8C006 Gm5776-201ENSMUST00000122119 321 ntBASIC9.15□□□□□ -0.94
Trim35Q8C006 Gm11686-201ENSMUST00000122397 333 ntBASIC9.15□□□□□ -0.94
Trim35Q8C006 Gm24597-201ENSMUST00000122503 300 ntBASIC9.15□□□□□ -0.94
Trim35Q8C006 Gm23792-201ENSMUST00000122557 93 ntBASIC9.15□□□□□ -0.94
Trim35Q8C006 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC9.15□□□□□ -0.94
Trim35Q8C006 Gprasp2-211ENSMUST00000173804 3814 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim35Q8C006 H2-M10.5-ps1-201ENSMUST00000174378 939 ntBASIC9.15□□□□□ -0.94
Trim35Q8C006 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 9.4 ms