Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
Col18a1P39061 Gm8595-201ENSMUST00000118250 630 ntBASIC8.36□□□□□ -1.07
Col18a1P39061 Gm13866-201ENSMUST00000118901 968 ntBASIC8.36□□□□□ -1.07
Col18a1P39061 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Col18a1P39061 Gm38015-201ENSMUST00000193048 188 ntBASIC8.36□□□□□ -1.07
Col18a1P39061 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC8.36□□□□□ -1.07
Col18a1P39061 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC8.36□□□□□ -1.07
Col18a1P39061 Gm44582-201ENSMUST00000209125 445 ntBASIC8.36□□□□□ -1.07
Col18a1P39061 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC8.36□□□□□ -1.07
Col18a1P39061 Gm40598-201ENSMUST00000222953 547 ntBASIC8.36□□□□□ -1.07
Col18a1P39061 AC154755.1-201ENSMUST00000225244 537 ntBASIC8.36□□□□□ -1.07
Col18a1P39061 Tecpr2-202ENSMUST00000169597 7780 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col18a1P39061 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col18a1P39061 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Col18a1P39061 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
Col18a1P39061 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Col18a1P39061 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col18a1P39061 Ank3-231ENSMUST00000182884 9963 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col18a1P39061 AC156802.2-201ENSMUST00000225239 5740 ntBASIC8.36□□□□□ -1.07
Col18a1P39061 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Col18a1P39061 Gm12919-201ENSMUST00000119855 1594 ntBASIC8.36□□□□□ -1.07
Col18a1P39061 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC8.36□□□□□ -1.07
Col18a1P39061 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col18a1P39061 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Col18a1P39061 Dusp3-201ENSMUST00000003612 4212 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col18a1P39061 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Col18a1P39061 Trerf1-205ENSMUST00000190080 7045 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Col18a1P39061 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC8.35□□□□□ -1.07
Col18a1P39061 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC8.35□□□□□ -1.07
Col18a1P39061 Mir6963-201ENSMUST00000183535 71 ntBASIC8.35□□□□□ -1.07
Col18a1P39061 Gm8826-201ENSMUST00000193161 948 ntBASIC8.35□□□□□ -1.07
Col18a1P39061 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC8.35□□□□□ -1.07
Col18a1P39061 Gm19174-201ENSMUST00000216944 956 ntBASIC8.35□□□□□ -1.07
Col18a1P39061 AC132384.6-201ENSMUST00000218976 1206 ntBASIC8.35□□□□□ -1.07
Col18a1P39061 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col18a1P39061 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Col18a1P39061 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col18a1P39061 Vmn1r51-203ENSMUST00000226542 4164 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Col18a1P39061 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Col18a1P39061 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
Col18a1P39061 Alkbh1-209ENSMUST00000162961 3857 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col18a1P39061 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Col18a1P39061 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Col18a1P39061 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Col18a1P39061 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col18a1P39061 Gm42490-201ENSMUST00000198595 2064 ntBASIC8.35□□□□□ -1.07
Col18a1P39061 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Col18a1P39061 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Col18a1P39061 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC8.35□□□□□ -1.07
Col18a1P39061 Vmn1r193-203ENSMUST00000227562 6840 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Col18a1P39061 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Col18a1P39061 Pogz-204ENSMUST00000107269 5966 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Col18a1P39061 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Col18a1P39061 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
Col18a1P39061 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Col18a1P39061 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC8.35□□□□□ -1.07
Col18a1P39061 Gm15161-201ENSMUST00000117340 387 ntBASIC8.35□□□□□ -1.07
Col18a1P39061 Gm15120-201ENSMUST00000120602 301 ntBASIC8.35□□□□□ -1.07
Col18a1P39061 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Col18a1P39061 Gm11545-201ENSMUST00000146507 375 ntBASIC8.35□□□□□ -1.07
Col18a1P39061 Gm23965-201ENSMUST00000157969 142 ntBASIC8.35□□□□□ -1.07
Col18a1P39061 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Col18a1P39061 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC8.35□□□□□ -1.07
Col18a1P39061 Gm5318-201ENSMUST00000205249 406 ntBASIC8.35□□□□□ -1.07
Col18a1P39061 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC8.35□□□□□ -1.07
Col18a1P39061 AC152169.2-201ENSMUST00000224558 613 ntBASIC8.35□□□□□ -1.07
Col18a1P39061 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Col18a1P39061 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Col18a1P39061 Hivep2-205ENSMUST00000191138 9846 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col18a1P39061 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC8.34□□□□□ -1.07
Col18a1P39061 Gm36527-201ENSMUST00000195500 3029 ntBASIC8.34□□□□□ -1.07
Col18a1P39061 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Col18a1P39061 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col18a1P39061 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Col18a1P39061 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC8.34□□□□□ -1.07
Col18a1P39061 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col18a1P39061 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Col18a1P39061 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Col18a1P39061 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Col18a1P39061 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Col18a1P39061 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Col18a1P39061 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Col18a1P39061 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Col18a1P39061 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Col18a1P39061 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col18a1P39061 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Col18a1P39061 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC8.34□□□□□ -1.07
Col18a1P39061 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col18a1P39061 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
Col18a1P39061 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC8.34□□□□□ -1.07
Col18a1P39061 Gm25758-201ENSMUST00000103987 129 ntBASIC8.34□□□□□ -1.07
Col18a1P39061 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Col18a1P39061 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC8.34□□□□□ -1.07
Col18a1P39061 Gm24295-201ENSMUST00000158298 131 ntBASIC8.34□□□□□ -1.07
Col18a1P39061 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col18a1P39061 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC8.34□□□□□ -1.07
Col18a1P39061 Gm43516-201ENSMUST00000196891 322 ntBASIC8.34□□□□□ -1.07
Col18a1P39061 Gm17766-201ENSMUST00000209223 442 ntBASIC8.34□□□□□ -1.07
Col18a1P39061 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC8.34□□□□□ -1.07
Col18a1P39061 AC132384.3-201ENSMUST00000219709 472 ntBASIC8.34□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 117.5 ms