Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm27976-201ENSMUST00000183635 162 ntBASIC3.4□□□□□ -1.87
Herc1E9PZP8 Gm8506-201ENSMUST00000186661 829 ntBASIC3.4□□□□□ -1.87
Herc1E9PZP8 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Herc1E9PZP8 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Herc1E9PZP8 Gm22807-201ENSMUST00000082737 129 ntBASIC3.4□□□□□ -1.87
Herc1E9PZP8 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Herc1E9PZP8 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Herc1E9PZP8 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Herc1E9PZP8 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Herc1E9PZP8 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC3.4□□□□□ -1.87
Herc1E9PZP8 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Herc1E9PZP8 Gm43970-201ENSMUST00000204346 3605 ntBASIC3.4□□□□□ -1.87
Herc1E9PZP8 Gm37132-201ENSMUST00000195553 2238 ntBASIC3.4□□□□□ -1.87
Herc1E9PZP8 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
Herc1E9PZP8 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Herc1E9PZP8 BC025920-201ENSMUST00000099442 2785 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Herc1E9PZP8 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Herc1E9PZP8 Scn2a-205ENSMUST00000200829 6348 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
Herc1E9PZP8 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Herc1E9PZP8 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Gm11633-201ENSMUST00000118176 444 ntBASIC3.39□□□□□ -1.87
Herc1E9PZP8 Gm11346-201ENSMUST00000118346 704 ntBASIC3.39□□□□□ -1.87
Herc1E9PZP8 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC3.39□□□□□ -1.87
Herc1E9PZP8 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Pdgfrb-202ENSMUST00000115274 5423 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Adgrl2-204ENSMUST00000195988 4541 ntTSL 5 BASIC3.39□□□□□ -1.87
Herc1E9PZP8 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC3.39□□□□□ -1.87
Herc1E9PZP8 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Gm28653-201ENSMUST00000185494 5276 ntBASIC3.39□□□□□ -1.87
Herc1E9PZP8 AC165080.3-201ENSMUST00000217162 3116 ntBASIC3.39□□□□□ -1.87
Herc1E9PZP8 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC3.39□□□□□ -1.87
Herc1E9PZP8 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Gm14107-201ENSMUST00000117774 330 ntBASIC3.39□□□□□ -1.87
Herc1E9PZP8 Gm7309-201ENSMUST00000121670 581 ntBASIC3.39□□□□□ -1.87
Herc1E9PZP8 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Gm6061-201ENSMUST00000175860 492 ntBASIC3.39□□□□□ -1.87
Herc1E9PZP8 Ighv10-4-201ENSMUST00000193702 299 ntBASIC3.39□□□□□ -1.87
Herc1E9PZP8 Gm23502-201ENSMUST00000083902 145 ntBASIC3.39□□□□□ -1.87
Herc1E9PZP8 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Pla2g4e-201ENSMUST00000090071 4477 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Herc1E9PZP8 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Grik1-202ENSMUST00000072256 3655 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Gm15044-201ENSMUST00000120703 598 ntBASIC3.39□□□□□ -1.87
Herc1E9PZP8 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC3.39□□□□□ -1.87
Herc1E9PZP8 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC3.39□□□□□ -1.87
Herc1E9PZP8 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Gm25665-201ENSMUST00000157695 110 ntBASIC3.39□□□□□ -1.87
Herc1E9PZP8 Gm25438-201ENSMUST00000158281 110 ntBASIC3.39□□□□□ -1.87
Herc1E9PZP8 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Gm33952-201ENSMUST00000197795 408 ntBASIC3.39□□□□□ -1.87
Herc1E9PZP8 Gm7443-201ENSMUST00000206355 378 ntBASIC3.39□□□□□ -1.87
Herc1E9PZP8 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC3.39□□□□□ -1.87
Herc1E9PZP8 Gm18924-201ENSMUST00000211929 316 ntBASIC3.39□□□□□ -1.87
Herc1E9PZP8 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Gm24706-201ENSMUST00000082806 137 ntBASIC3.39□□□□□ -1.87
Herc1E9PZP8 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Gm15170-201ENSMUST00000121593 2023 ntBASIC3.39□□□□□ -1.87
Herc1E9PZP8 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Gm5702-201ENSMUST00000185629 2469 ntBASIC3.39□□□□□ -1.87
Herc1E9PZP8 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 AC159264.1-201ENSMUST00000224844 4257 ntBASIC3.39□□□□□ -1.87
Herc1E9PZP8 Prdm15-201ENSMUST00000095849 6346 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Gm45632-201ENSMUST00000211532 1888 ntBASIC3.39□□□□□ -1.87
Herc1E9PZP8 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC3.39□□□□□ -1.87
Herc1E9PZP8 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms