Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdh23Q99PF4 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Cdh23Q99PF4 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdh23Q99PF4 Eif2ak4-204ENSMUST00000110870 5116 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdh23Q99PF4 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdh23Q99PF4 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Cdh23Q99PF4 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
Cdh23Q99PF4 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdh23Q99PF4 Gm14970-201ENSMUST00000122289 355 ntBASIC6.09□□□□□ -1.43
Cdh23Q99PF4 Mir199b-201ENSMUST00000175066 110 ntBASIC6.09□□□□□ -1.43
Cdh23Q99PF4 Gm29357-201ENSMUST00000186877 698 ntBASIC6.09□□□□□ -1.43
Cdh23Q99PF4 Gm5318-201ENSMUST00000205249 406 ntBASIC6.09□□□□□ -1.43
Cdh23Q99PF4 AC167222.2-201ENSMUST00000220014 295 ntBASIC6.09□□□□□ -1.43
Cdh23Q99PF4 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Cdh23Q99PF4 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdh23Q99PF4 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdh23Q99PF4 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Cdh23Q99PF4 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdh23Q99PF4 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Cdh23Q99PF4 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Cdh23Q99PF4 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdh23Q99PF4 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Cdh23Q99PF4 Abcc3-206ENSMUST00000178136 5005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdh23Q99PF4 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Cdh23Q99PF4 Pzp-201ENSMUST00000112132 4681 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Cdh23Q99PF4 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC6.09□□□□□ -1.44
Cdh23Q99PF4 Gm27690-201ENSMUST00000184596 126 ntBASIC6.09□□□□□ -1.44
Cdh23Q99PF4 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.09□□□□□ -1.44
Cdh23Q99PF4 AC153840.1-201ENSMUST00000219685 313 ntBASIC6.09□□□□□ -1.44
Cdh23Q99PF4 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Cdh23Q99PF4 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Cdh23Q99PF4 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
Cdh23Q99PF4 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC6.09□□□□□ -1.44
Cdh23Q99PF4 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.44
Cdh23Q99PF4 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC6.09□□□□□ -1.44
Cdh23Q99PF4 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
Cdh23Q99PF4 Sulf1-205ENSMUST00000186051 4563 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm19093-201ENSMUST00000210671 1454 ntBASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Vps8-204ENSMUST00000117598 4935 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm6101-201ENSMUST00000195384 1867 ntBASIC6.08□□□□□ -1.44
Cdh23Q99PF4 M6pr-ps-201ENSMUST00000120481 830 ntBASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm16276-201ENSMUST00000131218 262 ntBASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm18127-201ENSMUST00000208479 725 ntBASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm19174-201ENSMUST00000216944 956 ntBASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Mcm10-202ENSMUST00000102985 4867 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 1110002E22Rik-201ENSMUST00000163080 9741 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Tma16-201ENSMUST00000026681 4328 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm11498-201ENSMUST00000120660 949 ntBASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm5844-201ENSMUST00000119417 2191 ntBASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Dhdh-201ENSMUST00000011526 5323 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh23Q99PF4 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms