Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Msh4Q99MT2 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Msh4Q99MT2 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.26□□□□□ -1.41
Msh4Q99MT2 Gm2229-201ENSMUST00000193328 710 ntBASIC6.26□□□□□ -1.41
Msh4Q99MT2 Gm18445-201ENSMUST00000195502 774 ntBASIC6.26□□□□□ -1.41
Msh4Q99MT2 Gm43576-201ENSMUST00000197937 871 ntBASIC6.26□□□□□ -1.41
Msh4Q99MT2 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Msh4Q99MT2 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC6.26□□□□□ -1.41
Msh4Q99MT2 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.26□□□□□ -1.41
Msh4Q99MT2 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC6.26□□□□□ -1.41
Msh4Q99MT2 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Msh4Q99MT2 AC161250.1-201ENSMUST00000213426 1111 ntBASIC6.26□□□□□ -1.41
Msh4Q99MT2 AC153532.1-201ENSMUST00000218126 1111 ntBASIC6.26□□□□□ -1.41
Msh4Q99MT2 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.26□□□□□ -1.41
Msh4Q99MT2 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.26□□□□□ -1.41
Msh4Q99MT2 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.26□□□□□ -1.41
Msh4Q99MT2 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6.26□□□□□ -1.41
Msh4Q99MT2 AC135086.1-201ENSMUST00000228621 817 ntBASIC6.26□□□□□ -1.41
Msh4Q99MT2 Gm5341-201ENSMUST00000058881 489 ntBASIC6.26□□□□□ -1.41
Msh4Q99MT2 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC6.26□□□□□ -1.41
Msh4Q99MT2 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Msh4Q99MT2 Gm28392-201ENSMUST00000077630 393 ntBASIC6.26□□□□□ -1.41
Msh4Q99MT2 n-R5s56-201ENSMUST00000082521 105 ntBASIC6.26□□□□□ -1.41
Msh4Q99MT2 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Msh4Q99MT2 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Msh4Q99MT2 Pramel-201ENSMUST00000118979 1383 ntBASIC6.26□□□□□ -1.41
Msh4Q99MT2 Gm37772-201ENSMUST00000191635 1394 ntBASIC6.26□□□□□ -1.41
Msh4Q99MT2 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Msh4Q99MT2 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Msh4Q99MT2 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.26□□□□□ -1.41
Msh4Q99MT2 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC6.26□□□□□ -1.41
Msh4Q99MT2 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Msh4Q99MT2 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Msh4Q99MT2 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Gm43216-201ENSMUST00000196295 1333 ntBASIC6.25□□□□□ -1.41
Msh4Q99MT2 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Msh4Q99MT2 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Gm38156-201ENSMUST00000194601 2260 ntBASIC6.25□□□□□ -1.41
Msh4Q99MT2 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Gm9408-201ENSMUST00000197375 1505 ntBASIC6.25□□□□□ -1.41
Msh4Q99MT2 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Gm24888-201ENSMUST00000104387 130 ntBASIC6.25□□□□□ -1.41
Msh4Q99MT2 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Gm11504-201ENSMUST00000120211 173 ntBASIC6.25□□□□□ -1.41
Msh4Q99MT2 Gm11472-201ENSMUST00000121305 556 ntBASIC6.25□□□□□ -1.41
Msh4Q99MT2 Gm8722-201ENSMUST00000121466 769 ntBASIC6.25□□□□□ -1.41
Msh4Q99MT2 Gm12101-201ENSMUST00000121590 390 ntBASIC6.25□□□□□ -1.41
Msh4Q99MT2 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Gm4997-201ENSMUST00000154056 360 ntBASIC6.25□□□□□ -1.41
Msh4Q99MT2 Gm22600-201ENSMUST00000157598 269 ntBASIC6.25□□□□□ -1.41
Msh4Q99MT2 Gm25550-201ENSMUST00000158079 128 ntBASIC6.25□□□□□ -1.41
Msh4Q99MT2 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Gm27601-201ENSMUST00000184794 127 ntBASIC6.25□□□□□ -1.41
Msh4Q99MT2 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Igkv4-83-201ENSMUST00000196933 334 ntBASIC6.25□□□□□ -1.41
Msh4Q99MT2 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Gm45196-201ENSMUST00000206751 825 ntBASIC6.25□□□□□ -1.41
Msh4Q99MT2 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.25□□□□□ -1.41
Msh4Q99MT2 Gm7769-201ENSMUST00000212900 933 ntBASIC6.25□□□□□ -1.41
Msh4Q99MT2 Gm46191-201ENSMUST00000218899 433 ntBASIC6.25□□□□□ -1.41
Msh4Q99MT2 AC124601.1-201ENSMUST00000220531 135 ntBASIC6.25□□□□□ -1.41
Msh4Q99MT2 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.25□□□□□ -1.41
Msh4Q99MT2 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.25□□□□□ -1.41
Msh4Q99MT2 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Gm5436-201ENSMUST00000058103 643 ntBASIC6.25□□□□□ -1.41
Msh4Q99MT2 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Msh4Q99MT2 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC6.25□□□□□ -1.41
Msh4Q99MT2 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Msh4Q99MT2 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Gm44242-201ENSMUST00000204212 2721 ntBASIC6.25□□□□□ -1.41
Msh4Q99MT2 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Msh4Q99MT2 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm44667-201ENSMUST00000207632 3337 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 AU020206-202ENSMUST00000206358 3009 ntBASIC6.24□□□□□ -1.41
Msh4Q99MT2 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms