Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm42841-201ENSMUST00000199806 1932 ntBASIC7.95□□□□□ -1.14
Pcdhb3Q91XZ7 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Pcdhb3Q91XZ7 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Pcdhb3Q91XZ7 Rbx1-201ENSMUST00000023036 1655 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Pcdhb3Q91XZ7 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Pcdhb3Q91XZ7 Gm4275-205ENSMUST00000212624 1436 ntBASIC7.95□□□□□ -1.14
Pcdhb3Q91XZ7 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Pcdhb3Q91XZ7 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Pcdhb3Q91XZ7 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Gm37206-201ENSMUST00000195512 3069 ntBASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Gm37090-201ENSMUST00000195694 4105 ntBASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 2610008E11Rik-201ENSMUST00000039271 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Rrm1-201ENSMUST00000033283 3997 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 AC153862.1-201ENSMUST00000215700 3349 ntBASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Spef2-205ENSMUST00000162780 1639 ntTSL 5 BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Gm16701-201ENSMUST00000181309 1627 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Rhox4d-201ENSMUST00000115175 936 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Gm5388-201ENSMUST00000120059 1117 ntBASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Gm14425-201ENSMUST00000121240 606 ntBASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Gm15242-201ENSMUST00000122459 283 ntBASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 9530026F06Rik-201ENSMUST00000141000 892 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Gm22076-201ENSMUST00000158601 84 ntBASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Gm8338-201ENSMUST00000163928 363 ntBASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 H2-Aa-204ENSMUST00000174751 826 ntTSL 3 BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Mir5625-201ENSMUST00000176598 80 ntBASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Gm28149-201ENSMUST00000187102 378 ntBASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Gm28768-201ENSMUST00000189034 378 ntBASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Cnih4-205ENSMUST00000193907 531 ntTSL 2 BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Gm43797-201ENSMUST00000198221 532 ntBASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Ighv1-79-201ENSMUST00000200152 350 ntBASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Klra13-ps-203ENSMUST00000204367 850 ntBASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Gm18644-201ENSMUST00000211458 815 ntBASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Gm5023-201ENSMUST00000217442 587 ntBASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 AC166574.2-201ENSMUST00000226751 381 ntBASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Zfp473-201ENSMUST00000060270 3800 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Gm10024-201ENSMUST00000075421 553 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Gm4825-201ENSMUST00000079690 408 ntBASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Ezh1-202ENSMUST00000107284 4207 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Teddm1a-201ENSMUST00000050660 1317 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Gm26996-201ENSMUST00000204418 1359 ntBASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Gm42630-201ENSMUST00000195908 3448 ntBASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb3Q91XZ7 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Pcdhb3Q91XZ7 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC7.93□□□□□ -1.14
Pcdhb3Q91XZ7 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC7.93□□□□□ -1.14
Pcdhb3Q91XZ7 Gm20706-201ENSMUST00000175985 2023 ntBASIC7.93□□□□□ -1.14
Pcdhb3Q91XZ7 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Pcdhb3Q91XZ7 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb3Q91XZ7 Lipc-204ENSMUST00000216798 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb3Q91XZ7 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb3Q91XZ7 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb3Q91XZ7 AC139758.3-201ENSMUST00000226853 2704 ntBASIC7.93□□□□□ -1.14
Pcdhb3Q91XZ7 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb3Q91XZ7 Sorbs2-201ENSMUST00000067065 6337 ntTSL 5 BASIC7.93□□□□□ -1.14
Pcdhb3Q91XZ7 Gm22268-201ENSMUST00000104009 131 ntBASIC7.93□□□□□ -1.14
Pcdhb3Q91XZ7 Gm25803-201ENSMUST00000104419 131 ntBASIC7.93□□□□□ -1.14
Pcdhb3Q91XZ7 Mir467f-201ENSMUST00000116923 120 ntBASIC7.93□□□□□ -1.14
Pcdhb3Q91XZ7 Gm6181-201ENSMUST00000117187 264 ntBASIC7.93□□□□□ -1.14
Pcdhb3Q91XZ7 Gm13352-201ENSMUST00000117515 262 ntBASIC7.93□□□□□ -1.14
Pcdhb3Q91XZ7 Amd-ps4-201ENSMUST00000118392 1003 ntBASIC7.93□□□□□ -1.14
Pcdhb3Q91XZ7 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC7.93□□□□□ -1.14
Pcdhb3Q91XZ7 Gm12817-201ENSMUST00000119622 610 ntBASIC7.93□□□□□ -1.14
Pcdhb3Q91XZ7 Gm12189-201ENSMUST00000119779 912 ntBASIC7.93□□□□□ -1.14
Pcdhb3Q91XZ7 Mup-ps24-201ENSMUST00000119939 286 ntBASIC7.93□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 136.8 ms