Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC8.38□□□□□ -1.07
Col18a1P39061 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col18a1P39061 Gm23737-201ENSMUST00000082547 159 ntBASIC8.38□□□□□ -1.07
Col18a1P39061 Cpsf2-201ENSMUST00000047357 5732 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col18a1P39061 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Col18a1P39061 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col18a1P39061 Nedd4l-204ENSMUST00000224347 3150 ntBASIC8.38□□□□□ -1.07
Col18a1P39061 Chordc1-201ENSMUST00000001825 5789 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col18a1P39061 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col18a1P39061 Cyfip2-202ENSMUST00000093166 6298 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col18a1P39061 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col18a1P39061 Gatad2b-205ENSMUST00000199754 7438 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Col18a1P39061 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col18a1P39061 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col18a1P39061 Ick-202ENSMUST00000044551 6560 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col18a1P39061 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Col18a1P39061 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col18a1P39061 Vmn1r40-202ENSMUST00000226925 3011 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Col18a1P39061 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col18a1P39061 Gm45746-201ENSMUST00000212623 2447 ntBASIC8.38□□□□□ -1.07
Col18a1P39061 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Col18a1P39061 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col18a1P39061 Gm14746-201ENSMUST00000120309 741 ntBASIC8.38□□□□□ -1.07
Col18a1P39061 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC8.38□□□□□ -1.07
Col18a1P39061 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC8.38□□□□□ -1.07
Col18a1P39061 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC8.38□□□□□ -1.07
Col18a1P39061 Gm9671-201ENSMUST00000171502 547 ntBASIC8.38□□□□□ -1.07
Col18a1P39061 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC8.38□□□□□ -1.07
Col18a1P39061 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC8.38□□□□□ -1.07
Col18a1P39061 Gm37477-201ENSMUST00000195215 884 ntBASIC8.38□□□□□ -1.07
Col18a1P39061 AC117240.2-201ENSMUST00000220921 263 ntBASIC8.38□□□□□ -1.07
Col18a1P39061 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC8.38□□□□□ -1.07
Col18a1P39061 AC165260.1-201ENSMUST00000224127 683 ntBASIC8.38□□□□□ -1.07
Col18a1P39061 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC8.38□□□□□ -1.07
Col18a1P39061 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Col18a1P39061 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col18a1P39061 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col18a1P39061 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Col18a1P39061 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
Col18a1P39061 Gm37570-201ENSMUST00000195411 3106 ntBASIC8.37□□□□□ -1.07
Col18a1P39061 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Col18a1P39061 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col18a1P39061 Ccdc180-204ENSMUST00000178561 5081 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Col18a1P39061 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col18a1P39061 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Col18a1P39061 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col18a1P39061 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col18a1P39061 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col18a1P39061 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col18a1P39061 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col18a1P39061 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col18a1P39061 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col18a1P39061 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col18a1P39061 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col18a1P39061 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col18a1P39061 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col18a1P39061 Gm13818-201ENSMUST00000119441 511 ntBASIC8.37□□□□□ -1.07
Col18a1P39061 Gm22276-201ENSMUST00000122469 129 ntBASIC8.37□□□□□ -1.07
Col18a1P39061 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col18a1P39061 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col18a1P39061 Gm26312-201ENSMUST00000157769 165 ntBASIC8.37□□□□□ -1.07
Col18a1P39061 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC8.37□□□□□ -1.07
Col18a1P39061 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC8.37□□□□□ -1.07
Col18a1P39061 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col18a1P39061 Gm37103-201ENSMUST00000191830 115 ntBASIC8.37□□□□□ -1.07
Col18a1P39061 Gm36974-201ENSMUST00000194200 1071 ntBASIC8.37□□□□□ -1.07
Col18a1P39061 Gm42522-201ENSMUST00000196071 255 ntBASIC8.37□□□□□ -1.07
Col18a1P39061 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col18a1P39061 AC167222.2-201ENSMUST00000220014 295 ntBASIC8.37□□□□□ -1.07
Col18a1P39061 Gm5080-201ENSMUST00000220341 743 ntBASIC8.37□□□□□ -1.07
Col18a1P39061 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC8.37□□□□□ -1.07
Col18a1P39061 AC154527.1-201ENSMUST00000225809 242 ntBASIC8.37□□□□□ -1.07
Col18a1P39061 Gm5087-204ENSMUST00000225820 645 ntBASIC8.37□□□□□ -1.07
Col18a1P39061 Gm10064-201ENSMUST00000071235 399 ntBASIC8.37□□□□□ -1.07
Col18a1P39061 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Col18a1P39061 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC8.37□□□□□ -1.07
Col18a1P39061 Gm42661-201ENSMUST00000202364 1442 ntBASIC8.37□□□□□ -1.07
Col18a1P39061 Gm42561-201ENSMUST00000202563 1442 ntBASIC8.37□□□□□ -1.07
Col18a1P39061 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col18a1P39061 Fnbp1-201ENSMUST00000073879 8469 ntTSL 5 BASIC8.37□□□□□ -1.07
Col18a1P39061 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col18a1P39061 Lrat-201ENSMUST00000029632 5351 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col18a1P39061 Gm45263-201ENSMUST00000210377 1375 ntBASIC8.37□□□□□ -1.07
Col18a1P39061 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC8.37□□□□□ -1.07
Col18a1P39061 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col18a1P39061 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Col18a1P39061 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col18a1P39061 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col18a1P39061 Wdfy3-207ENSMUST00000212024 10539 ntTSL 5 BASIC8.36□□□□□ -1.07
Col18a1P39061 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC8.36□□□□□ -1.07
Col18a1P39061 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
Col18a1P39061 Dusp3-203ENSMUST00000107173 4311 ntTSL 2 BASIC8.36□□□□□ -1.07
Col18a1P39061 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Col18a1P39061 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC8.36□□□□□ -1.07
Col18a1P39061 Rps6ka6-201ENSMUST00000065976 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col18a1P39061 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Col18a1P39061 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col18a1P39061 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Col18a1P39061 AC107453.1-201ENSMUST00000227490 3268 ntBASIC8.36□□□□□ -1.07
Col18a1P39061 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms