Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC6.11□□□□□ -1.43
Sox3P53784 Gm4617-201ENSMUST00000178993 331 ntBASIC6.11□□□□□ -1.43
Sox3P53784 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sox3P53784 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sox3P53784 Gm28620-201ENSMUST00000190463 439 ntBASIC6.11□□□□□ -1.43
Sox3P53784 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC6.11□□□□□ -1.43
Sox3P53784 Igkv3-8-201ENSMUST00000197635 339 ntBASIC6.11□□□□□ -1.43
Sox3P53784 Gm36448-201ENSMUST00000199916 438 ntBASIC6.11□□□□□ -1.43
Sox3P53784 Gm7463-201ENSMUST00000201541 547 ntBASIC6.11□□□□□ -1.43
Sox3P53784 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.11□□□□□ -1.43
Sox3P53784 CT485607.3-201ENSMUST00000213361 672 ntBASIC6.11□□□□□ -1.43
Sox3P53784 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC6.11□□□□□ -1.43
Sox3P53784 Gm19212-201ENSMUST00000216642 862 ntBASIC6.11□□□□□ -1.43
Sox3P53784 Gm46203-201ENSMUST00000218130 478 ntBASIC6.11□□□□□ -1.43
Sox3P53784 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC6.11□□□□□ -1.43
Sox3P53784 Gm4012-201ENSMUST00000221504 581 ntBASIC6.11□□□□□ -1.43
Sox3P53784 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sox3P53784 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Sox3P53784 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Sox3P53784 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Sox3P53784 Gm5436-201ENSMUST00000058103 643 ntBASIC6.11□□□□□ -1.43
Sox3P53784 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Sox3P53784 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Sox3P53784 n-R5s36-201ENSMUST00000082998 119 ntBASIC6.11□□□□□ -1.43
Sox3P53784 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC6.11□□□□□ -1.43
Sox3P53784 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.11□□□□□ -1.43
Sox3P53784 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC6.11□□□□□ -1.43
Sox3P53784 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sox3P53784 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.11□□□□□ -1.43
Sox3P53784 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.11□□□□□ -1.43
Sox3P53784 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Sox3P53784 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.11□□□□□ -1.43
Sox3P53784 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sox3P53784 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sox3P53784 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sox3P53784 AC154597.1-201ENSMUST00000224095 2713 ntBASIC6.11□□□□□ -1.43
Sox3P53784 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Sox3P53784 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC6.11□□□□□ -1.43
Sox3P53784 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sox3P53784 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.11□□□□□ -1.43
Sox3P53784 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sox3P53784 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sox3P53784 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sox3P53784 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sox3P53784 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Sox3P53784 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sox3P53784 Gm9839-201ENSMUST00000195252 1437 ntBASIC6.1□□□□□ -1.43
Sox3P53784 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sox3P53784 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sox3P53784 Gm24473-201ENSMUST00000104483 131 ntBASIC6.1□□□□□ -1.43
Sox3P53784 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC6.1□□□□□ -1.43
Sox3P53784 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC6.1□□□□□ -1.43
Sox3P53784 Gm15073-201ENSMUST00000117432 634 ntBASIC6.1□□□□□ -1.43
Sox3P53784 Gm12242-201ENSMUST00000118824 738 ntBASIC6.1□□□□□ -1.43
Sox3P53784 Gm7058-201ENSMUST00000119209 902 ntBASIC6.1□□□□□ -1.43
Sox3P53784 Gm15781-201ENSMUST00000120216 323 ntBASIC6.1□□□□□ -1.43
Sox3P53784 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.1□□□□□ -1.43
Sox3P53784 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sox3P53784 Mir3090-201ENSMUST00000175597 87 ntBASIC6.1□□□□□ -1.43
Sox3P53784 Mir6903-201ENSMUST00000183597 88 ntBASIC6.1□□□□□ -1.43
Sox3P53784 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sox3P53784 Gm37203-201ENSMUST00000191618 385 ntBASIC6.1□□□□□ -1.43
Sox3P53784 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sox3P53784 Gm44111-201ENSMUST00000204649 399 ntBASIC6.1□□□□□ -1.43
Sox3P53784 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC6.1□□□□□ -1.43
Sox3P53784 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC6.1□□□□□ -1.43
Sox3P53784 Gm5324-201ENSMUST00000208115 476 ntBASIC6.1□□□□□ -1.43
Sox3P53784 Gm31166-201ENSMUST00000209326 288 ntBASIC6.1□□□□□ -1.43
Sox3P53784 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC6.1□□□□□ -1.43
Sox3P53784 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.1□□□□□ -1.43
Sox3P53784 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sox3P53784 Gm17849-201ENSMUST00000219788 853 ntBASIC6.1□□□□□ -1.43
Sox3P53784 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC6.1□□□□□ -1.43
Sox3P53784 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sox3P53784 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sox3P53784 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Sox3P53784 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sox3P53784 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sox3P53784 AC130661.1-201ENSMUST00000218248 1680 ntBASIC6.1□□□□□ -1.43
Sox3P53784 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sox3P53784 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sox3P53784 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sox3P53784 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sox3P53784 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sox3P53784 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sox3P53784 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC6.1□□□□□ -1.43
Sox3P53784 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sox3P53784 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sox3P53784 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sox3P53784 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sox3P53784 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Sox3P53784 Gm44417-201ENSMUST00000203298 3359 ntBASIC6.09□□□□□ -1.43
Sox3P53784 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC6.09□□□□□ -1.43
Sox3P53784 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sox3P53784 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sox3P53784 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sox3P53784 AC159308.1-201ENSMUST00000216615 1351 ntBASIC6.09□□□□□ -1.43
Sox3P53784 AC125328.1-201ENSMUST00000226812 2265 ntBASIC6.09□□□□□ -1.43
Sox3P53784 Gm9226-201ENSMUST00000188352 3489 ntBASIC6.09□□□□□ -1.43
Sox3P53784 Gm21122-201ENSMUST00000191548 3452 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms