Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
P01852 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC5.86□□□□□ -1.47
P01852 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC5.86□□□□□ -1.47
P01852 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
P01852 Gm18808-201ENSMUST00000173316 462 ntBASIC5.86□□□□□ -1.47
P01852 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
P01852 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC5.86□□□□□ -1.47
P01852 Gm23632-201ENSMUST00000175289 125 ntBASIC5.86□□□□□ -1.47
P01852 Gm24300-201ENSMUST00000177809 109 ntBASIC5.86□□□□□ -1.47
P01852 Gm24017-201ENSMUST00000178726 109 ntBASIC5.86□□□□□ -1.47
P01852 Gm23952-201ENSMUST00000179380 109 ntBASIC5.86□□□□□ -1.47
P01852 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
P01852 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
P01852 Gm17847-201ENSMUST00000188261 1127 ntBASIC5.86□□□□□ -1.47
P01852 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC5.86□□□□□ -1.47
P01852 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC5.86□□□□□ -1.47
P01852 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC5.86□□□□□ -1.47
P01852 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC5.86□□□□□ -1.47
P01852 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC5.86□□□□□ -1.47
P01852 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
P01852 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC5.86□□□□□ -1.47
P01852 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
P01852 AC131117.1-201ENSMUST00000225154 1171 ntBASIC5.86□□□□□ -1.47
P01852 AC159267.1-201ENSMUST00000226702 678 ntBASIC5.86□□□□□ -1.47
P01852 AC146601.1-201ENSMUST00000227910 905 ntBASIC5.86□□□□□ -1.47
P01852 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
P01852 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
P01852 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
P01852 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
P01852 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
P01852 Gm21122-201ENSMUST00000191548 3452 ntBASIC5.86□□□□□ -1.47
P01852 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
P01852 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
P01852 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
P01852 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC5.86□□□□□ -1.47
P01852 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC5.86□□□□□ -1.47
P01852 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
P01852 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
P01852 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
P01852 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
P01852 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
P01852 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
P01852 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
P01852 Gm20300-201ENSMUST00000214634 3440 ntBASIC5.86□□□□□ -1.47
P01852 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
P01852 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
P01852 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
P01852 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
P01852 Gm37531-201ENSMUST00000191628 5415 ntBASIC5.85□□□□□ -1.47
P01852 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
P01852 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
P01852 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC5.85□□□□□ -1.47
P01852 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
P01852 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC5.85□□□□□ -1.47
P01852 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
P01852 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
P01852 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
P01852 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC5.85□□□□□ -1.47
P01852 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
P01852 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
P01852 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
P01852 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
P01852 Gm37023-201ENSMUST00000192895 2426 ntBASIC5.85□□□□□ -1.47
P01852 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC5.85□□□□□ -1.47
P01852 Gm20789-201ENSMUST00000221002 4195 ntBASIC5.85□□□□□ -1.47
P01852 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
P01852 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
P01852 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
P01852 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
P01852 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
P01852 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
P01852 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
P01852 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
P01852 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
P01852 Gm14513-201ENSMUST00000117403 123 ntBASIC5.85□□□□□ -1.47
P01852 Gm13176-201ENSMUST00000117910 477 ntBASIC5.85□□□□□ -1.47
P01852 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC5.85□□□□□ -1.47
P01852 Gm12654-201ENSMUST00000120387 587 ntBASIC5.85□□□□□ -1.47
P01852 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC5.85□□□□□ -1.47
P01852 Gm25057-201ENSMUST00000157366 88 ntBASIC5.85□□□□□ -1.47
P01852 Gm26037-201ENSMUST00000158150 311 ntBASIC5.85□□□□□ -1.47
P01852 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC5.85□□□□□ -1.47
P01852 Gm6611-201ENSMUST00000163830 1272 ntBASIC5.85□□□□□ -1.47
P01852 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
P01852 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
P01852 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC5.85□□□□□ -1.47
P01852 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC5.85□□□□□ -1.47
P01852 Gm28455-201ENSMUST00000189105 1290 ntBASIC5.85□□□□□ -1.47
P01852 Gm43098-201ENSMUST00000199989 1297 ntBASIC5.85□□□□□ -1.47
P01852 Gm7663-201ENSMUST00000201151 1240 ntBASIC5.85□□□□□ -1.47
P01852 Gm42799-201ENSMUST00000201331 328 ntBASIC5.85□□□□□ -1.47
P01852 Gm42646-201ENSMUST00000202233 914 ntBASIC5.85□□□□□ -1.47
P01852 Gm44607-201ENSMUST00000205611 1090 ntBASIC5.85□□□□□ -1.47
P01852 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
P01852 AC115793.1-201ENSMUST00000216605 215 ntBASIC5.85□□□□□ -1.47
P01852 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC5.85□□□□□ -1.47
P01852 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
P01852 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC5.85□□□□□ -1.47
P01852 Gm7413-201ENSMUST00000219498 462 ntBASIC5.85□□□□□ -1.47
P01852 Gm19340-201ENSMUST00000221995 345 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms