Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Gm14300-201ENSMUST00000120800 946 ntBASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Gm11677-201ENSMUST00000121349 977 ntBASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Gm9671-201ENSMUST00000171502 547 ntBASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Gm37548-201ENSMUST00000194519 3814 ntBASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 AC158986.1-201ENSMUST00000228391 3455 ntBASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Sipa1l1-205ENSMUST00000220963 5907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Pard3b-203ENSMUST00000094906 7676 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 AC107232.1-201ENSMUST00000227785 1503 ntBASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Wdr11-201ENSMUST00000084519 4550 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Gm22899-201ENSMUST00000104540 131 ntBASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Gm7973-201ENSMUST00000122107 488 ntBASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Gm18150-201ENSMUST00000195341 645 ntBASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Gm6558-203ENSMUST00000195395 612 ntTSL 5 BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 AC152169.2-201ENSMUST00000224558 613 ntBASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Gm37945-201ENSMUST00000192536 4367 ntBASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 AC124421.1-201ENSMUST00000219114 4154 ntBASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Gm15335-201ENSMUST00000122442 411 ntBASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Gm29332-201ENSMUST00000190829 227 ntBASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Gm7048-201ENSMUST00000199395 1891 ntBASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Gm37199-201ENSMUST00000193881 4065 ntBASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Gm15075-201ENSMUST00000122187 477 ntBASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Gm5834-201ENSMUST00000126680 1026 ntBASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Gm42799-201ENSMUST00000201331 328 ntBASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Gm29785-201ENSMUST00000217033 383 ntBASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 AC126554.2-201ENSMUST00000223259 400 ntBASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 AC113031.6-202ENSMUST00000228468 1145 ntBASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Gm43190-201ENSMUST00000187850 1779 ntBASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Gm7961-201ENSMUST00000201338 1436 ntBASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Flnb-201ENSMUST00000052678 9100 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a3E9PWQ3 Gm38042-201ENSMUST00000191614 5208 ntBASIC6.02□□□□□ -1.45
Col6a3E9PWQ3 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Col6a3E9PWQ3 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a3E9PWQ3 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a3E9PWQ3 Gm13681-201ENSMUST00000117925 210 ntBASIC6.02□□□□□ -1.45
Col6a3E9PWQ3 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a3E9PWQ3 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a3E9PWQ3 Gm37973-201ENSMUST00000195767 1289 ntBASIC6.02□□□□□ -1.45
Col6a3E9PWQ3 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC6.02□□□□□ -1.45
Col6a3E9PWQ3 Gm4321-201ENSMUST00000200520 442 ntBASIC6.02□□□□□ -1.45
Col6a3E9PWQ3 Gm43919-201ENSMUST00000204303 364 ntBASIC6.02□□□□□ -1.45
Col6a3E9PWQ3 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a3E9PWQ3 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a3E9PWQ3 Snord15b-201ENSMUST00000083032 145 ntBASIC6.02□□□□□ -1.45
Col6a3E9PWQ3 n-R5s13-201ENSMUST00000093707 119 ntBASIC6.02□□□□□ -1.45
Col6a3E9PWQ3 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Col6a3E9PWQ3 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a3E9PWQ3 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Col6a3E9PWQ3 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a3E9PWQ3 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms