Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 AC140930.1-201ENSMUST00000221889 389 ntBASIC5.28□□□□□ -1.56
Usf3B2RUQ2 AC154481.1-201ENSMUST00000223532 331 ntBASIC5.28□□□□□ -1.56
Usf3B2RUQ2 AV026068-216ENSMUST00000223874 328 ntBASIC5.28□□□□□ -1.56
Usf3B2RUQ2 AV026068-218ENSMUST00000223980 575 ntBASIC5.28□□□□□ -1.56
Usf3B2RUQ2 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Rybp-ps-201ENSMUST00000069489 681 ntBASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Gm23238-201ENSMUST00000083007 164 ntBASIC5.28□□□□□ -1.56
Usf3B2RUQ2 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Gm43483-201ENSMUST00000196724 2860 ntBASIC5.28□□□□□ -1.56
Usf3B2RUQ2 AC158388.2-201ENSMUST00000223665 1314 ntBASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Gm17137-201ENSMUST00000164106 4371 ntBASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Gm42541-201ENSMUST00000199871 2249 ntBASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 AC130217.2-201ENSMUST00000224009 2990 ntBASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Gm42613-201ENSMUST00000199975 1931 ntBASIC5.28□□□□□ -1.56
Usf3B2RUQ2 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Gm22676-201ENSMUST00000116972 129 ntBASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Gm11504-201ENSMUST00000120211 173 ntBASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Mir5107-201ENSMUST00000175586 88 ntBASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Gm43157-201ENSMUST00000198223 412 ntBASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Gm44265-201ENSMUST00000203631 465 ntBASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Gm44919-201ENSMUST00000208587 1073 ntBASIC5.28□□□□□ -1.56
Usf3B2RUQ2 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Gm9535-201ENSMUST00000218499 768 ntBASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Gm19116-201ENSMUST00000218592 642 ntBASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Usf3B2RUQ2 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gm21122-201ENSMUST00000191548 3452 ntBASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gm43982-201ENSMUST00000204995 1829 ntBASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gm11833-201ENSMUST00000118393 853 ntBASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gm13207-201ENSMUST00000119862 773 ntBASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gm12262-201ENSMUST00000119915 305 ntBASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gm25824-201ENSMUST00000157092 121 ntBASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gm2959-201ENSMUST00000169844 621 ntBASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gm9529-201ENSMUST00000177598 579 ntBASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 AC132260.1-201ENSMUST00000225499 734 ntBASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gm25587-201ENSMUST00000082498 166 ntBASIC5.27□□□□□ -1.57
Usf3B2RUQ2 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gm26289-201ENSMUST00000104169 131 ntBASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gm11848-201ENSMUST00000121207 973 ntBASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gm25057-201ENSMUST00000157366 88 ntBASIC5.27□□□□□ -1.57
Usf3B2RUQ2 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gm4617-201ENSMUST00000178993 331 ntBASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms