Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Gm18585-201ENSMUST00000215197 556 ntBASIC8.01□□□□□ -1.13
Trim11Q99PQ2 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 AC127224.1-201ENSMUST00000218094 453 ntBASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 AC125405.2-201ENSMUST00000227862 383 ntBASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim11Q99PQ2 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm37169-201ENSMUST00000195599 4161 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm43707-201ENSMUST00000196451 3187 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim11Q99PQ2 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm20706-201ENSMUST00000175985 2023 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC8□□□□□ -1.13
Trim11Q99PQ2 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim11Q99PQ2 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC8□□□□□ -1.13
Trim11Q99PQ2 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC8□□□□□ -1.13
Trim11Q99PQ2 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Trim11Q99PQ2 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Trim11Q99PQ2 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm14864-201ENSMUST00000116164 1087 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm13195-201ENSMUST00000117229 261 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm11865-201ENSMUST00000118093 859 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm12375-201ENSMUST00000119331 921 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm15158-201ENSMUST00000120577 570 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC8□□□□□ -1.13
Trim11Q99PQ2 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm24960-201ENSMUST00000157923 90 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm25770-201ENSMUST00000158566 115 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm17205-201ENSMUST00000168370 1207 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm20491-201ENSMUST00000173765 1241 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm4956-202ENSMUST00000178869 672 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm17953-201ENSMUST00000192061 667 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm24826-202ENSMUST00000197298 216 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm43848-201ENSMUST00000198060 1247 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm42573-201ENSMUST00000202327 478 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm42673-201ENSMUST00000202676 337 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC8□□□□□ -1.13
Trim11Q99PQ2 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm5586-201ENSMUST00000206264 795 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC8□□□□□ -1.13
Trim11Q99PQ2 AC239878.2-201ENSMUST00000224048 464 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim11Q99PQ2 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm5528-201ENSMUST00000076314 480 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm26130-201ENSMUST00000083171 138 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm22053-201ENSMUST00000083394 200 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC8□□□□□ -1.13
Trim11Q99PQ2 Mir463-201ENSMUST00000093570 75 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm37945-201ENSMUST00000192536 4367 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim11Q99PQ2 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC8□□□□□ -1.13
Trim11Q99PQ2 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm38200-201ENSMUST00000192083 2111 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Trim11Q99PQ2 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC8□□□□□ -1.13
Trim11Q99PQ2 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim11Q99PQ2 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC8□□□□□ -1.13
Trim11Q99PQ2 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC8□□□□□ -1.13
Trim11Q99PQ2 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC8□□□□□ -1.13
Trim11Q99PQ2 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim11Q99PQ2 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC8□□□□□ -1.13
Trim11Q99PQ2 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC8□□□□□ -1.13
Trim11Q99PQ2 AC139758.3-201ENSMUST00000226853 2704 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Gm28667-201ENSMUST00000189873 2171 ntBASIC8□□□□□ -1.13
Trim11Q99PQ2 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC8□□□□□ -1.13
Trim11Q99PQ2 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC8□□□□□ -1.13
Trim11Q99PQ2 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms