Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm14267-201ENSMUST00000119751 496 ntBASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Gm25013-201ENSMUST00000158402 128 ntBASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Gm17198-201ENSMUST00000171792 1154 ntBASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Gm8895-201ENSMUST00000172300 1223 ntBASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Mir5125-201ENSMUST00000175240 79 ntBASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Gm29160-201ENSMUST00000190094 699 ntBASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Gm34149-201ENSMUST00000203547 304 ntBASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Ces2b-201ENSMUST00000059449 3408 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 AC166358.5-201ENSMUST00000220706 1302 ntBASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Gm15531-201ENSMUST00000118062 252 ntBASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Gm14745-201ENSMUST00000118480 1096 ntBASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Gm24731-201ENSMUST00000158227 131 ntBASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Gm25906-201ENSMUST00000158489 126 ntBASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Mir3062-201ENSMUST00000174986 105 ntBASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Gm2058-201ENSMUST00000178791 560 ntBASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Gm36448-201ENSMUST00000199916 438 ntBASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 AC138284.5-201ENSMUST00000214389 652 ntBASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 AC115793.1-201ENSMUST00000216605 215 ntBASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 AC154452.1-201ENSMUST00000225819 241 ntBASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 AC124709.3-201ENSMUST00000227294 171 ntBASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Fmr1-206ENSMUST00000114657 4076 ntTSL 5 BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Gm45250-201ENSMUST00000209414 3592 ntBASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 AC122305.1-201ENSMUST00000214803 3921 ntBASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Gm15073-201ENSMUST00000117432 634 ntBASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Mirt2-201ENSMUST00000175179 285 ntBASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Gm29454-201ENSMUST00000190805 393 ntBASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Gm28467-201ENSMUST00000190981 318 ntBASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Igkv3-8-201ENSMUST00000197635 339 ntBASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Gm44382-201ENSMUST00000198683 122 ntBASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Gm5318-201ENSMUST00000205249 406 ntBASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Mir375-201ENSMUST00000083682 64 ntBASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Gm44045-201ENSMUST00000204906 2520 ntBASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a6Q8C6K9 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Gm43181-201ENSMUST00000197001 2072 ntBASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Gm13490-201ENSMUST00000143870 2409 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 128.2 ms