Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm5928-201ENSMUST00000221839 466 ntBASIC5.98□□□□□ -1.45
Cdc40Q9DC48 AV026068-218ENSMUST00000223980 575 ntBASIC5.98□□□□□ -1.45
Cdc40Q9DC48 AC154642.1-201ENSMUST00000224173 740 ntBASIC5.98□□□□□ -1.45
Cdc40Q9DC48 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC5.98□□□□□ -1.45
Cdc40Q9DC48 AC154757.2-201ENSMUST00000228885 743 ntBASIC5.98□□□□□ -1.45
Cdc40Q9DC48 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Cdc40Q9DC48 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdc40Q9DC48 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
Cdc40Q9DC48 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cdc40Q9DC48 Wnk1-218ENSMUST00000161512 1426 ntBASIC5.98□□□□□ -1.45
Cdc40Q9DC48 Gm37289-201ENSMUST00000195409 1402 ntBASIC5.98□□□□□ -1.45
Cdc40Q9DC48 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cdc40Q9DC48 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cdc40Q9DC48 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Cdc40Q9DC48 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Cdc40Q9DC48 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cdc40Q9DC48 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cdc40Q9DC48 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 AC130217.2-201ENSMUST00000224009 2990 ntBASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Gm44584-201ENSMUST00000208395 2880 ntBASIC5.97□□□□□ -1.45
Cdc40Q9DC48 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 CT009480.2-201ENSMUST00000225152 3369 ntBASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Gm42989-201ENSMUST00000200646 2306 ntBASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Thap6-201ENSMUST00000191860 3151 ntBASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 AC155234.1-201ENSMUST00000225610 2823 ntBASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Gm38081-201ENSMUST00000192680 1645 ntBASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Gm14580-201ENSMUST00000119122 718 ntBASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Gm3810-201ENSMUST00000122413 476 ntBASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Gm8648-201ENSMUST00000122457 221 ntBASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Gm26023-201ENSMUST00000122722 313 ntBASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Gm4152-201ENSMUST00000172675 259 ntBASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Gm20432-201ENSMUST00000173716 250 ntBASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Gm17847-201ENSMUST00000188261 1127 ntBASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Gm2229-201ENSMUST00000193328 710 ntBASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Gm38237-201ENSMUST00000193366 376 ntBASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 AC157085.1-201ENSMUST00000216343 162 ntBASIC5.97□□□□□ -1.45
Cdc40Q9DC48 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 AC132954.2-201ENSMUST00000222400 403 ntBASIC5.97□□□□□ -1.45
Cdc40Q9DC48 AC158750.1-201ENSMUST00000226163 634 ntBASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Cma2-202ENSMUST00000228263 857 ntBASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 n-R5s89-201ENSMUST00000083532 104 ntBASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 AC161247.1-201ENSMUST00000217744 2295 ntBASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Gm37967-201ENSMUST00000195634 2665 ntBASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Gm45457-201ENSMUST00000209931 3089 ntBASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Cdc40Q9DC48 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Cdc40Q9DC48 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC5.96□□□□□ -1.45
Cdc40Q9DC48 Gm43496-201ENSMUST00000201682 3001 ntBASIC5.96□□□□□ -1.45
Cdc40Q9DC48 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC5.96□□□□□ -1.46
Cdc40Q9DC48 CT010577.1-202ENSMUST00000226187 1903 ntBASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
Cdc40Q9DC48 AC103672.2-201ENSMUST00000228146 1687 ntBASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Gm24272-201ENSMUST00000102329 98 ntBASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Gm11462-201ENSMUST00000117749 562 ntBASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Gm11833-201ENSMUST00000118393 853 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms