Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Mmp3P28862 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Mmp3P28862 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Mmp3P28862 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Mmp3P28862 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Mmp3P28862 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Mmp3P28862 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Mmp3P28862 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Mmp3P28862 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Mmp3P28862 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Mmp3P28862 Gm23485-201ENSMUST00000104181 155 ntBASIC6.77□□□□□ -1.33
Mmp3P28862 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Mmp3P28862 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Mmp3P28862 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC6.77□□□□□ -1.33
Mmp3P28862 Gm9027-201ENSMUST00000165914 661 ntBASIC6.77□□□□□ -1.33
Mmp3P28862 Gm6918-201ENSMUST00000167622 1222 ntBASIC6.77□□□□□ -1.33
Mmp3P28862 Gm17198-201ENSMUST00000171792 1154 ntBASIC6.77□□□□□ -1.33
Mmp3P28862 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.77□□□□□ -1.33
Mmp3P28862 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Mmp3P28862 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC6.77□□□□□ -1.33
Mmp3P28862 Gm27460-201ENSMUST00000184213 100 ntBASIC6.77□□□□□ -1.33
Mmp3P28862 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC6.77□□□□□ -1.33
Mmp3P28862 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Mmp3P28862 Gm24454-201ENSMUST00000083349 132 ntBASIC6.77□□□□□ -1.33
Mmp3P28862 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC6.77□□□□□ -1.33
Mmp3P28862 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Mmp3P28862 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Mmp3P28862 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Mmp3P28862 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Mmp3P28862 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Mmp3P28862 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC6.77□□□□□ -1.33
Mmp3P28862 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Mmp3P28862 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Mmp3P28862 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC6.77□□□□□ -1.33
Mmp3P28862 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC6.77□□□□□ -1.33
Mmp3P28862 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Mmp3P28862 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Mmp3P28862 Gm37953-201ENSMUST00000195293 1884 ntBASIC6.77□□□□□ -1.33
Mmp3P28862 AC153152.1-201ENSMUST00000221105 2742 ntBASIC6.77□□□□□ -1.33
Mmp3P28862 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.77□□□□□ -1.33
Mmp3P28862 AC183268.1-201ENSMUST00000215753 2837 ntBASIC6.77□□□□□ -1.33
Mmp3P28862 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Mmp3P28862 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.76□□□□□ -1.33
Mmp3P28862 Gm5949-201ENSMUST00000213468 1421 ntBASIC6.76□□□□□ -1.33
Mmp3P28862 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Mmp3P28862 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Mmp3P28862 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.76□□□□□ -1.33
Mmp3P28862 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Mmp3P28862 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.76□□□□□ -1.33
Mmp3P28862 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
Mmp3P28862 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Mmp3P28862 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Mmp3P28862 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Mmp3P28862 Gm14529-201ENSMUST00000117894 406 ntBASIC6.76□□□□□ -1.33
Mmp3P28862 Gm8317-201ENSMUST00000121261 471 ntBASIC6.76□□□□□ -1.33
Mmp3P28862 Gm7931-201ENSMUST00000121537 271 ntBASIC6.76□□□□□ -1.33
Mmp3P28862 Gm14457-201ENSMUST00000148069 1161 ntBASIC6.76□□□□□ -1.33
Mmp3P28862 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC6.76□□□□□ -1.33
Mmp3P28862 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.76□□□□□ -1.33
Mmp3P28862 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Mmp3P28862 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC6.76□□□□□ -1.33
Mmp3P28862 Gm28885-201ENSMUST00000185615 563 ntBASIC6.76□□□□□ -1.33
Mmp3P28862 Gm7266-201ENSMUST00000187999 405 ntBASIC6.76□□□□□ -1.33
Mmp3P28862 Gm17847-201ENSMUST00000188261 1127 ntBASIC6.76□□□□□ -1.33
Mmp3P28862 Gm6290-201ENSMUST00000207666 1158 ntBASIC6.76□□□□□ -1.33
Mmp3P28862 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC6.76□□□□□ -1.33
Mmp3P28862 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC6.76□□□□□ -1.33
Mmp3P28862 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.76□□□□□ -1.33
Mmp3P28862 Gm10688-201ENSMUST00000214985 520 ntBASIC6.76□□□□□ -1.33
Mmp3P28862 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC6.76□□□□□ -1.33
Mmp3P28862 Gm18592-201ENSMUST00000221529 276 ntBASIC6.76□□□□□ -1.33
Mmp3P28862 Gm7557-201ENSMUST00000221935 865 ntBASIC6.76□□□□□ -1.33
Mmp3P28862 AC163651.1-201ENSMUST00000222500 372 ntBASIC6.76□□□□□ -1.33
Mmp3P28862 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC6.76□□□□□ -1.33
Mmp3P28862 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Mmp3P28862 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Mmp3P28862 Gm14802-201ENSMUST00000121944 1885 ntBASIC6.76□□□□□ -1.33
Mmp3P28862 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Mmp3P28862 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Mmp3P28862 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Mmp3P28862 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Mmp3P28862 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Mmp3P28862 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Mmp3P28862 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Mmp3P28862 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Mmp3P28862 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Mmp3P28862 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Mmp3P28862 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Mmp3P28862 AC166358.5-201ENSMUST00000220706 1302 ntBASIC6.76□□□□□ -1.33
Mmp3P28862 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Mmp3P28862 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
Mmp3P28862 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC6.75□□□□□ -1.33
Mmp3P28862 AC154806.2-201ENSMUST00000227212 2385 ntBASIC6.75□□□□□ -1.33
Mmp3P28862 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Mmp3P28862 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Mmp3P28862 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Mmp3P28862 Gm9403-201ENSMUST00000196299 2181 ntBASIC6.75□□□□□ -1.33
Mmp3P28862 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC6.75□□□□□ -1.33
Mmp3P28862 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Mmp3P28862 Gm7146-201ENSMUST00000116079 739 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms