Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col1a1P11087 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Col1a1P11087 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Col1a1P11087 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC7.41□□□□□ -1.22
Col1a1P11087 Gm42881-201ENSMUST00000198636 3344 ntBASIC7.41□□□□□ -1.22
Col1a1P11087 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col1a1P11087 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col1a1P11087 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col1a1P11087 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Col1a1P11087 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Col1a1P11087 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col1a1P11087 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Col1a1P11087 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col1a1P11087 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col1a1P11087 Gm15040-201ENSMUST00000118561 1241 ntBASIC7.41□□□□□ -1.22
Col1a1P11087 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC7.41□□□□□ -1.22
Col1a1P11087 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC7.41□□□□□ -1.22
Col1a1P11087 Gm24731-201ENSMUST00000158227 131 ntBASIC7.41□□□□□ -1.22
Col1a1P11087 Gm24741-201ENSMUST00000158857 106 ntBASIC7.41□□□□□ -1.22
Col1a1P11087 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC7.41□□□□□ -1.22
Col1a1P11087 Mir6992-201ENSMUST00000183342 109 ntBASIC7.41□□□□□ -1.22
Col1a1P11087 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC7.41□□□□□ -1.22
Col1a1P11087 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC7.41□□□□□ -1.22
Col1a1P11087 Gm2325-201ENSMUST00000186637 581 ntBASIC7.41□□□□□ -1.22
Col1a1P11087 Gm6137-201ENSMUST00000187552 578 ntBASIC7.41□□□□□ -1.22
Col1a1P11087 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC7.41□□□□□ -1.22
Col1a1P11087 Gm28467-201ENSMUST00000190981 318 ntBASIC7.41□□□□□ -1.22
Col1a1P11087 Gm37103-201ENSMUST00000191830 115 ntBASIC7.41□□□□□ -1.22
Col1a1P11087 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC7.41□□□□□ -1.22
Col1a1P11087 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC7.41□□□□□ -1.22
Col1a1P11087 Gm31166-201ENSMUST00000209326 288 ntBASIC7.41□□□□□ -1.22
Col1a1P11087 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Col1a1P11087 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC7.41□□□□□ -1.22
Col1a1P11087 AC163664.2-201ENSMUST00000228894 459 ntBASIC7.41□□□□□ -1.22
Col1a1P11087 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Col1a1P11087 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Col1a1P11087 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col1a1P11087 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Col1a1P11087 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
Col1a1P11087 Gm43019-201ENSMUST00000196948 2863 ntBASIC7.41□□□□□ -1.22
Col1a1P11087 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Col1a1P11087 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col1a1P11087 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col1a1P11087 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Col1a1P11087 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Col1a1P11087 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col1a1P11087 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Col1a1P11087 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col1a1P11087 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
Col1a1P11087 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Col1a1P11087 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col1a1P11087 Wnk1-218ENSMUST00000161512 1426 ntBASIC7.4□□□□□ -1.22
Col1a1P11087 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Col1a1P11087 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Col1a1P11087 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Col1a1P11087 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC7.4□□□□□ -1.22
Col1a1P11087 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
Col1a1P11087 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col1a1P11087 Gm15233-201ENSMUST00000118747 400 ntBASIC7.4□□□□□ -1.22
Col1a1P11087 Gm14521-201ENSMUST00000119545 350 ntBASIC7.4□□□□□ -1.22
Col1a1P11087 Gm14900-201ENSMUST00000120304 733 ntBASIC7.4□□□□□ -1.22
Col1a1P11087 Gm14331-201ENSMUST00000120396 409 ntBASIC7.4□□□□□ -1.22
Col1a1P11087 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Col1a1P11087 Gm11545-201ENSMUST00000146507 375 ntBASIC7.4□□□□□ -1.22
Col1a1P11087 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Col1a1P11087 Mir3095-201ENSMUST00000175552 87 ntBASIC7.4□□□□□ -1.22
Col1a1P11087 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC7.4□□□□□ -1.22
Col1a1P11087 Gm24303-201ENSMUST00000178237 126 ntBASIC7.4□□□□□ -1.22
Col1a1P11087 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC7.4□□□□□ -1.22
Col1a1P11087 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Col1a1P11087 Gm43054-201ENSMUST00000199495 884 ntBASIC7.4□□□□□ -1.22
Col1a1P11087 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Col1a1P11087 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC7.4□□□□□ -1.22
Col1a1P11087 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC7.4□□□□□ -1.22
Col1a1P11087 Gm33242-201ENSMUST00000212130 1057 ntBASIC7.4□□□□□ -1.22
Col1a1P11087 Gm9202-201ENSMUST00000223036 437 ntBASIC7.4□□□□□ -1.22
Col1a1P11087 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Col1a1P11087 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col1a1P11087 Gm9788-201ENSMUST00000057038 906 ntBASIC7.4□□□□□ -1.22
Col1a1P11087 Gm5341-201ENSMUST00000058881 489 ntBASIC7.4□□□□□ -1.22
Col1a1P11087 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC7.4□□□□□ -1.22
Col1a1P11087 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Col1a1P11087 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC7.4□□□□□ -1.23
Col1a1P11087 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
Col1a1P11087 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col1a1P11087 Gm44178-201ENSMUST00000205229 2930 ntBASIC7.4□□□□□ -1.23
Col1a1P11087 AC141476.1-201ENSMUST00000224988 3387 ntBASIC7.4□□□□□ -1.23
Col1a1P11087 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col1a1P11087 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
Col1a1P11087 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col1a1P11087 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col1a1P11087 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col1a1P11087 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Col1a1P11087 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col1a1P11087 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col1a1P11087 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Col1a1P11087 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC7.39□□□□□ -1.23
Col1a1P11087 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC7.39□□□□□ -1.23
Col1a1P11087 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col1a1P11087 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms