Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usp54Q8BL06 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp54Q8BL06 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp54Q8BL06 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC8.93□□□□□ -0.98
Usp54Q8BL06 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp54Q8BL06 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC8.93□□□□□ -0.98
Usp54Q8BL06 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC8.92□□□□□ -0.98
Usp54Q8BL06 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usp54Q8BL06 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Usp54Q8BL06 AC159006.2-201ENSMUST00000228734 4144 ntBASIC8.92□□□□□ -0.98
Usp54Q8BL06 Tep1-201ENSMUST00000006444 8171 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usp54Q8BL06 Gm13245-201ENSMUST00000119646 260 ntBASIC8.92□□□□□ -0.98
Usp54Q8BL06 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC8.92□□□□□ -0.98
Usp54Q8BL06 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Usp54Q8BL06 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC8.92□□□□□ -0.98
Usp54Q8BL06 Gm27355-201ENSMUST00000185045 128 ntBASIC8.92□□□□□ -0.98
Usp54Q8BL06 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Usp54Q8BL06 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC8.92□□□□□ -0.98
Usp54Q8BL06 Gm9480-201ENSMUST00000198038 616 ntBASIC8.92□□□□□ -0.98
Usp54Q8BL06 Gm33242-201ENSMUST00000212130 1057 ntBASIC8.92□□□□□ -0.98
Usp54Q8BL06 LOC665443-201ENSMUST00000212284 796 ntBASIC8.92□□□□□ -0.98
Usp54Q8BL06 Gm18863-201ENSMUST00000217004 1299 ntBASIC8.92□□□□□ -0.98
Usp54Q8BL06 AC168056.2-201ENSMUST00000223591 269 ntBASIC8.92□□□□□ -0.98
Usp54Q8BL06 AC154767.2-201ENSMUST00000224584 414 ntBASIC8.92□□□□□ -0.98
Usp54Q8BL06 AC154556.1-201ENSMUST00000224587 885 ntBASIC8.92□□□□□ -0.98
Usp54Q8BL06 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
Usp54Q8BL06 n-R5s204-201ENSMUST00000082972 119 ntBASIC8.92□□□□□ -0.98
Usp54Q8BL06 Mir143-201ENSMUST00000083511 63 ntBASIC8.92□□□□□ -0.98
Usp54Q8BL06 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usp54Q8BL06 Gm43258-201ENSMUST00000200312 1950 ntBASIC8.92□□□□□ -0.98
Usp54Q8BL06 Gm37092-201ENSMUST00000193381 1518 ntBASIC8.92□□□□□ -0.98
Usp54Q8BL06 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC8.92□□□□□ -0.98
Usp54Q8BL06 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Usp54Q8BL06 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Usp54Q8BL06 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usp54Q8BL06 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usp54Q8BL06 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usp54Q8BL06 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usp54Q8BL06 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Usp54Q8BL06 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC8.91□□□□□ -0.98
Usp54Q8BL06 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC8.91□□□□□ -0.98
Usp54Q8BL06 Gm12077-201ENSMUST00000117049 364 ntBASIC8.91□□□□□ -0.98
Usp54Q8BL06 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usp54Q8BL06 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usp54Q8BL06 Gm22636-201ENSMUST00000158142 275 ntBASIC8.91□□□□□ -0.98
Usp54Q8BL06 Gm2959-201ENSMUST00000169844 621 ntBASIC8.91□□□□□ -0.98
Usp54Q8BL06 Gm9671-201ENSMUST00000171502 547 ntBASIC8.91□□□□□ -0.98
Usp54Q8BL06 Gm3605-201ENSMUST00000185858 440 ntBASIC8.91□□□□□ -0.98
Usp54Q8BL06 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC8.91□□□□□ -0.98
Usp54Q8BL06 Gm37358-201ENSMUST00000195492 479 ntBASIC8.91□□□□□ -0.98
Usp54Q8BL06 Igkv4-75-201ENSMUST00000197204 359 ntBASIC8.91□□□□□ -0.98
Usp54Q8BL06 Gm2287-202ENSMUST00000199619 1000 ntBASIC8.91□□□□□ -0.98
Usp54Q8BL06 Gm44940-201ENSMUST00000206225 1247 ntBASIC8.91□□□□□ -0.98
Usp54Q8BL06 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC8.91□□□□□ -0.98
Usp54Q8BL06 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC8.91□□□□□ -0.98
Usp54Q8BL06 AC170810.1-201ENSMUST00000228267 672 ntBASIC8.91□□□□□ -0.98
Usp54Q8BL06 AC166369.2-201ENSMUST00000228403 308 ntBASIC8.91□□□□□ -0.98
Usp54Q8BL06 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usp54Q8BL06 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC8.91□□□□□ -0.98
Usp54Q8BL06 Gm23330-201ENSMUST00000082660 164 ntBASIC8.91□□□□□ -0.98
Usp54Q8BL06 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usp54Q8BL06 Tiam1-213ENSMUST00000163370 7255 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usp54Q8BL06 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usp54Q8BL06 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Usp54Q8BL06 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Usp54Q8BL06 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Usp54Q8BL06 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Usp54Q8BL06 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Usp54Q8BL06 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usp54Q8BL06 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC8.91□□□□□ -0.98
Usp54Q8BL06 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usp54Q8BL06 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Usp54Q8BL06 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Usp54Q8BL06 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usp54Q8BL06 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Usp54Q8BL06 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Usp54Q8BL06 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Usp54Q8BL06 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Usp54Q8BL06 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Usp54Q8BL06 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Usp54Q8BL06 Helz2-202ENSMUST00000108831 10109 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
Usp54Q8BL06 Gm14510-201ENSMUST00000116165 1092 ntBASIC8.9□□□□□ -0.98
Usp54Q8BL06 Gm12040-201ENSMUST00000118357 537 ntBASIC8.9□□□□□ -0.98
Usp54Q8BL06 Gm14158-201ENSMUST00000118409 308 ntBASIC8.9□□□□□ -0.98
Usp54Q8BL06 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC8.9□□□□□ -0.98
Usp54Q8BL06 Gm6744-201ENSMUST00000119303 543 ntBASIC8.9□□□□□ -0.98
Usp54Q8BL06 Gm11245-201ENSMUST00000119419 1037 ntBASIC8.9□□□□□ -0.98
Usp54Q8BL06 Gm14970-201ENSMUST00000122289 355 ntBASIC8.9□□□□□ -0.98
Usp54Q8BL06 Klra13-ps-201ENSMUST00000125813 802 ntBASIC8.9□□□□□ -0.98
Usp54Q8BL06 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.98
Usp54Q8BL06 Gm23553-201ENSMUST00000157817 295 ntBASIC8.9□□□□□ -0.98
Usp54Q8BL06 Gm3008-201ENSMUST00000160566 571 ntBASIC8.9□□□□□ -0.98
Usp54Q8BL06 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Usp54Q8BL06 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.98
Usp54Q8BL06 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Usp54Q8BL06 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Usp54Q8BL06 Gm38181-201ENSMUST00000181357 720 ntBASIC8.9□□□□□ -0.98
Usp54Q8BL06 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC8.9□□□□□ -0.98
Usp54Q8BL06 Gm44432-201ENSMUST00000203342 938 ntBASIC8.9□□□□□ -0.98
Usp54Q8BL06 Gm5318-201ENSMUST00000205249 406 ntBASIC8.9□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms