Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Col2a1P28481 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC7.19□□□□□ -1.26
Col2a1P28481 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Col2a1P28481 Gm18878-201ENSMUST00000223071 1443 ntBASIC7.19□□□□□ -1.26
Col2a1P28481 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col2a1P28481 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col2a1P28481 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC7.18□□□□□ -1.26
Col2a1P28481 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col2a1P28481 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC7.18□□□□□ -1.26
Col2a1P28481 Gm14938-201ENSMUST00000119482 943 ntBASIC7.18□□□□□ -1.26
Col2a1P28481 Gm11533-201ENSMUST00000120287 477 ntBASIC7.18□□□□□ -1.26
Col2a1P28481 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC7.18□□□□□ -1.26
Col2a1P28481 Gm25433-201ENSMUST00000158283 286 ntBASIC7.18□□□□□ -1.26
Col2a1P28481 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC7.18□□□□□ -1.26
Col2a1P28481 Gm27024-201ENSMUST00000182561 755 ntBASIC7.18□□□□□ -1.26
Col2a1P28481 Mir7220-201ENSMUST00000183978 60 ntBASIC7.18□□□□□ -1.26
Col2a1P28481 Gm38097-201ENSMUST00000192936 439 ntBASIC7.18□□□□□ -1.26
Col2a1P28481 Gm43222-201ENSMUST00000199013 603 ntBASIC7.18□□□□□ -1.26
Col2a1P28481 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC7.18□□□□□ -1.26
Col2a1P28481 Gm45850-201ENSMUST00000212536 338 ntBASIC7.18□□□□□ -1.26
Col2a1P28481 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC7.18□□□□□ -1.26
Col2a1P28481 AC159208.1-201ENSMUST00000221403 649 ntBASIC7.18□□□□□ -1.26
Col2a1P28481 Gm2614-201ENSMUST00000223227 403 ntBASIC7.18□□□□□ -1.26
Col2a1P28481 AC163664.2-201ENSMUST00000228894 459 ntBASIC7.18□□□□□ -1.26
Col2a1P28481 Snora44-201ENSMUST00000082670 129 ntBASIC7.18□□□□□ -1.26
Col2a1P28481 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Col2a1P28481 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC7.18□□□□□ -1.26
Col2a1P28481 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col2a1P28481 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC7.18□□□□□ -1.26
Col2a1P28481 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col2a1P28481 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Col2a1P28481 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC7.18□□□□□ -1.26
Col2a1P28481 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC7.18□□□□□ -1.26
Col2a1P28481 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col2a1P28481 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col2a1P28481 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col2a1P28481 Gm5182-201ENSMUST00000217708 6092 ntBASIC7.18□□□□□ -1.26
Col2a1P28481 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col2a1P28481 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Col2a1P28481 AC156025.2-201ENSMUST00000225907 1533 ntBASIC7.18□□□□□ -1.26
Col2a1P28481 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC7.18□□□□□ -1.26
Col2a1P28481 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col2a1P28481 Gm13193-201ENSMUST00000117275 225 ntBASIC7.17□□□□□ -1.26
Col2a1P28481 Gm13489-201ENSMUST00000121234 971 ntBASIC7.17□□□□□ -1.26
Col2a1P28481 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
Col2a1P28481 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Col2a1P28481 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC7.17□□□□□ -1.26
Col2a1P28481 Gm27219-201ENSMUST00000184633 742 ntBASIC7.17□□□□□ -1.26
Col2a1P28481 Gm8367-201ENSMUST00000186145 887 ntBASIC7.17□□□□□ -1.26
Col2a1P28481 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC7.17□□□□□ -1.26
Col2a1P28481 Gm5717-201ENSMUST00000198243 1062 ntBASIC7.17□□□□□ -1.26
Col2a1P28481 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC7.17□□□□□ -1.26
Col2a1P28481 Gm43105-201ENSMUST00000202987 459 ntBASIC7.17□□□□□ -1.26
Col2a1P28481 Gm31861-201ENSMUST00000204563 672 ntBASIC7.17□□□□□ -1.26
Col2a1P28481 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC7.17□□□□□ -1.26
Col2a1P28481 Gm45734-201ENSMUST00000211916 411 ntBASIC7.17□□□□□ -1.26
Col2a1P28481 CT030645.3-201ENSMUST00000225483 1022 ntBASIC7.17□□□□□ -1.26
Col2a1P28481 AC154718.1-201ENSMUST00000226676 250 ntBASIC7.17□□□□□ -1.26
Col2a1P28481 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col2a1P28481 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Col2a1P28481 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC7.17□□□□□ -1.26
Col2a1P28481 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
Col2a1P28481 Gm37151-201ENSMUST00000194631 5007 ntBASIC7.17□□□□□ -1.26
Col2a1P28481 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC7.17□□□□□ -1.26
Col2a1P28481 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC7.17□□□□□ -1.26
Col2a1P28481 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC7.17□□□□□ -1.26
Col2a1P28481 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col2a1P28481 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col2a1P28481 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col2a1P28481 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col2a1P28481 Gm43279-201ENSMUST00000202376 2512 ntBASIC7.17□□□□□ -1.26
Col2a1P28481 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Col2a1P28481 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
Col2a1P28481 Gm13428-201ENSMUST00000117540 365 ntBASIC7.17□□□□□ -1.26
Col2a1P28481 Gm14098-201ENSMUST00000119295 623 ntBASIC7.17□□□□□ -1.26
Col2a1P28481 Gm15781-201ENSMUST00000120216 323 ntBASIC7.17□□□□□ -1.26
Col2a1P28481 Gm15801-201ENSMUST00000120920 522 ntBASIC7.17□□□□□ -1.26
Col2a1P28481 Gm8783-201ENSMUST00000159764 522 ntBASIC7.17□□□□□ -1.26
Col2a1P28481 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col2a1P28481 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC7.17□□□□□ -1.26
Col2a1P28481 Gm18199-201ENSMUST00000173820 835 ntBASIC7.17□□□□□ -1.26
Col2a1P28481 Gm18191-201ENSMUST00000174624 824 ntBASIC7.17□□□□□ -1.26
Col2a1P28481 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC7.17□□□□□ -1.26
Col2a1P28481 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
Col2a1P28481 Mir6362-201ENSMUST00000184329 107 ntBASIC7.17□□□□□ -1.26
Col2a1P28481 Mir7674-201ENSMUST00000184964 63 ntBASIC7.17□□□□□ -1.26
Col2a1P28481 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Col2a1P28481 Gm37517-201ENSMUST00000194004 1289 ntBASIC7.17□□□□□ -1.26
Col2a1P28481 Gm44382-201ENSMUST00000198683 122 ntBASIC7.17□□□□□ -1.26
Col2a1P28481 AC122393.2-201ENSMUST00000226404 1093 ntBASIC7.17□□□□□ -1.26
Col2a1P28481 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col2a1P28481 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col2a1P28481 Gm5582-201ENSMUST00000075251 522 ntBASIC7.17□□□□□ -1.26
Col2a1P28481 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Col2a1P28481 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Col2a1P28481 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col2a1P28481 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Col2a1P28481 Gm6820-201ENSMUST00000188803 2173 ntBASIC7.17□□□□□ -1.26
Col2a1P28481 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Col2a1P28481 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms