Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Vps53Q8CCB4 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC7.65□□□□□ -1.19
Vps53Q8CCB4 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Vps53Q8CCB4 Gm42930-201ENSMUST00000200872 3260 ntBASIC7.65□□□□□ -1.19
Vps53Q8CCB4 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Vps53Q8CCB4 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Vps53Q8CCB4 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Gm10555-201ENSMUST00000193178 1791 ntBASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Gm37347-201ENSMUST00000193969 3071 ntBASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Vps53Q8CCB4 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Gm9575-201ENSMUST00000122140 1339 ntBASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Mir708-201ENSMUST00000102189 109 ntBASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Gm12842-201ENSMUST00000117298 476 ntBASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Gm15616-201ENSMUST00000118662 375 ntBASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Gm22311-201ENSMUST00000158006 110 ntBASIC7.64□□□□□ -1.19
Vps53Q8CCB4 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Gm28846-201ENSMUST00000189161 368 ntBASIC7.64□□□□□ -1.19
Vps53Q8CCB4 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Gm43689-201ENSMUST00000195951 427 ntBASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Gm43160-201ENSMUST00000196453 421 ntBASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC7.64□□□□□ -1.19
Vps53Q8CCB4 AC073562.1-201ENSMUST00000222117 401 ntBASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Gm24621-201ENSMUST00000082679 140 ntBASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Gm6990-201ENSMUST00000086830 348 ntBASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC7.64□□□□□ -1.19
Vps53Q8CCB4 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Vps53Q8CCB4 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Vps53Q8CCB4 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Gm37541-201ENSMUST00000192464 2315 ntBASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC7.63□□□□□ -1.19
Vps53Q8CCB4 AC115760.1-201ENSMUST00000225160 1327 ntBASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Gm11462-201ENSMUST00000117749 562 ntBASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Gm11972-201ENSMUST00000118514 389 ntBASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Gm13222-201ENSMUST00000119638 138 ntBASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Gm11485-201ENSMUST00000120048 1175 ntBASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Gm25117-201ENSMUST00000157194 144 ntBASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Gm22764-201ENSMUST00000158370 92 ntBASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Gm23386-201ENSMUST00000158585 144 ntBASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC7.63□□□□□ -1.19
Vps53Q8CCB4 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Vps53Q8CCB4 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Gm29013-201ENSMUST00000187431 237 ntBASIC7.63□□□□□ -1.19
Vps53Q8CCB4 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Vps53Q8CCB4 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Gm28586-201ENSMUST00000189857 456 ntBASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Gm37493-201ENSMUST00000193167 433 ntBASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Gm18781-201ENSMUST00000211252 924 ntBASIC7.63□□□□□ -1.19
Vps53Q8CCB4 AC154558.1-201ENSMUST00000222278 415 ntBASIC7.63□□□□□ -1.19
Vps53Q8CCB4 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Gm7252-201ENSMUST00000223284 456 ntBASIC7.63□□□□□ -1.19
Vps53Q8CCB4 AC131187.2-201ENSMUST00000223936 994 ntBASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Vps53Q8CCB4 AW822073-201ENSMUST00000075305 555 ntBASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Gm25587-201ENSMUST00000082498 166 ntBASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Vps53Q8CCB4 AL450321.1-201ENSMUST00000220600 3550 ntBASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Vps53Q8CCB4 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Dnm3os-201ENSMUST00000139662 7928 ntBASIC7.62□□□□□ -1.19
Vps53Q8CCB4 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms