Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm3608-201ENSMUST00000086725 2858 ntBASIC4.23□□□□□ -1.73
PrkdcP97313 Nedd4-201ENSMUST00000034740 5499 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 Gm14746-201ENSMUST00000120309 741 ntBASIC4.23□□□□□ -1.73
PrkdcP97313 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PrkdcP97313 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC4.23□□□□□ -1.73
PrkdcP97313 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 Gm36999-201ENSMUST00000192756 1046 ntBASIC4.23□□□□□ -1.73
PrkdcP97313 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC4.23□□□□□ -1.73
PrkdcP97313 Glud-ps-201ENSMUST00000206310 657 ntBASIC4.23□□□□□ -1.73
PrkdcP97313 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC4.23□□□□□ -1.73
PrkdcP97313 Gm4263-201ENSMUST00000220693 1101 ntBASIC4.23□□□□□ -1.73
PrkdcP97313 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.23□□□□□ -1.73
PrkdcP97313 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
PrkdcP97313 Gm2531-201ENSMUST00000075609 512 ntBASIC4.23□□□□□ -1.73
PrkdcP97313 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Cep57l1-205ENSMUST00000187143 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Htr5a-201ENSMUST00000036227 5376 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Tet3-202ENSMUST00000089622 10904 ntTSL 5 BASIC4.22□□□□□ -1.73
PrkdcP97313 Gm13899-201ENSMUST00000121519 1255 ntBASIC4.22□□□□□ -1.73
PrkdcP97313 Gm37272-201ENSMUST00000193401 488 ntBASIC4.22□□□□□ -1.73
PrkdcP97313 Gm7733-201ENSMUST00000199038 919 ntBASIC4.22□□□□□ -1.73
PrkdcP97313 Gm2614-201ENSMUST00000223227 403 ntBASIC4.22□□□□□ -1.73
PrkdcP97313 Gm23502-201ENSMUST00000083902 145 ntBASIC4.22□□□□□ -1.73
PrkdcP97313 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
PrkdcP97313 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
PrkdcP97313 Retreg1-203ENSMUST00000226438 2783 ntBASIC4.22□□□□□ -1.73
PrkdcP97313 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC4.22□□□□□ -1.73
PrkdcP97313 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 AC154828.1-201ENSMUST00000220696 2810 ntBASIC4.22□□□□□ -1.73
PrkdcP97313 Gm37940-201ENSMUST00000194243 3251 ntBASIC4.22□□□□□ -1.73
PrkdcP97313 Stat2-202ENSMUST00000105238 4397 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC4.22□□□□□ -1.73
PrkdcP97313 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
PrkdcP97313 Gm37633-201ENSMUST00000192858 2700 ntBASIC4.22□□□□□ -1.73
PrkdcP97313 Ppfia2-201ENSMUST00000029404 5429 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC4.22□□□□□ -1.73
PrkdcP97313 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC4.22□□□□□ -1.73
PrkdcP97313 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC4.22□□□□□ -1.73
PrkdcP97313 Gm23233-201ENSMUST00000157301 137 ntBASIC4.22□□□□□ -1.73
PrkdcP97313 Gm17511-201ENSMUST00000172206 342 ntBASIC4.22□□□□□ -1.73
PrkdcP97313 Gm44902-201ENSMUST00000206177 805 ntBASIC4.22□□□□□ -1.73
PrkdcP97313 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Arhgap32-206ENSMUST00000182802 5621 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Dcp1a-201ENSMUST00000022535 5576 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Gm13870-201ENSMUST00000117214 1023 ntBASIC4.22□□□□□ -1.73
PrkdcP97313 Gm15186-201ENSMUST00000119345 563 ntBASIC4.22□□□□□ -1.73
PrkdcP97313 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC4.22□□□□□ -1.73
PrkdcP97313 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC4.22□□□□□ -1.73
PrkdcP97313 Gm26106-201ENSMUST00000157254 228 ntBASIC4.22□□□□□ -1.73
PrkdcP97313 Gm6541-201ENSMUST00000165542 561 ntBASIC4.22□□□□□ -1.73
PrkdcP97313 Gm8524-201ENSMUST00000186232 379 ntBASIC4.22□□□□□ -1.73
PrkdcP97313 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PrkdcP97313 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC4.22□□□□□ -1.73
PrkdcP97313 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC4.22□□□□□ -1.73
PrkdcP97313 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC4.22□□□□□ -1.73
PrkdcP97313 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC4.22□□□□□ -1.73
PrkdcP97313 Olfr923-204ENSMUST00000219798 1068 ntBASIC4.22□□□□□ -1.73
PrkdcP97313 Gm5087-204ENSMUST00000225820 645 ntBASIC4.22□□□□□ -1.73
PrkdcP97313 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PrkdcP97313 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC4.22□□□□□ -1.73
PrkdcP97313 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Gm9386-201ENSMUST00000095195 381 ntBASIC4.22□□□□□ -1.73
PrkdcP97313 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC4.22□□□□□ -1.73
PrkdcP97313 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Gm6878-201ENSMUST00000100448 2018 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PrkdcP97313 Gm38124-201ENSMUST00000191710 2581 ntBASIC4.21□□□□□ -1.73
PrkdcP97313 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
PrkdcP97313 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC4.21□□□□□ -1.73
PrkdcP97313 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC4.21□□□□□ -1.73
PrkdcP97313 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
PrkdcP97313 Plb1-206ENSMUST00000202220 4771 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
PrkdcP97313 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms