Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
Sox3P53784 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Sox3P53784 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Sox3P53784 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sox3P53784 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Sox3P53784 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sox3P53784 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sox3P53784 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Sox3P53784 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.23□□□□□ -1.41
Sox3P53784 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
Sox3P53784 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sox3P53784 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC6.23□□□□□ -1.41
Sox3P53784 Gm11972-201ENSMUST00000118514 389 ntBASIC6.23□□□□□ -1.41
Sox3P53784 Gm16511-201ENSMUST00000120019 564 ntBASIC6.23□□□□□ -1.41
Sox3P53784 Gm16179-201ENSMUST00000120685 373 ntBASIC6.23□□□□□ -1.41
Sox3P53784 Gm12618-201ENSMUST00000121754 483 ntBASIC6.23□□□□□ -1.41
Sox3P53784 Rps29-ps-201ENSMUST00000122083 172 ntBASIC6.23□□□□□ -1.41
Sox3P53784 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sox3P53784 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC6.23□□□□□ -1.41
Sox3P53784 Gm23674-201ENSMUST00000157473 131 ntBASIC6.23□□□□□ -1.41
Sox3P53784 Gm23031-201ENSMUST00000157998 119 ntBASIC6.23□□□□□ -1.41
Sox3P53784 Gm17366-201ENSMUST00000167629 187 ntBASIC6.23□□□□□ -1.41
Sox3P53784 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sox3P53784 Gm37475-201ENSMUST00000193107 1015 ntBASIC6.23□□□□□ -1.41
Sox3P53784 Gm3351-201ENSMUST00000193454 505 ntBASIC6.23□□□□□ -1.41
Sox3P53784 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sox3P53784 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC6.23□□□□□ -1.41
Sox3P53784 Gm18409-202ENSMUST00000220105 529 ntBASIC6.23□□□□□ -1.41
Sox3P53784 AC140288.1-201ENSMUST00000226329 503 ntBASIC6.23□□□□□ -1.41
Sox3P53784 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Sox3P53784 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sox3P53784 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sox3P53784 Gm10555-201ENSMUST00000193178 1791 ntBASIC6.23□□□□□ -1.41
Sox3P53784 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Sox3P53784 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sox3P53784 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sox3P53784 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sox3P53784 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC6.23□□□□□ -1.41
Sox3P53784 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sox3P53784 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sox3P53784 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Sox3P53784 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sox3P53784 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sox3P53784 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sox3P53784 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC6.22□□□□□ -1.41
Sox3P53784 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Sox3P53784 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sox3P53784 Gm44194-201ENSMUST00000204222 3229 ntBASIC6.22□□□□□ -1.41
Sox3P53784 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC6.22□□□□□ -1.41
Sox3P53784 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Sox3P53784 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sox3P53784 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sox3P53784 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Sox3P53784 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Sox3P53784 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Sox3P53784 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sox3P53784 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.22□□□□□ -1.41
Sox3P53784 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sox3P53784 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC6.22□□□□□ -1.41
Sox3P53784 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Sox3P53784 Gm13702-201ENSMUST00000118542 825 ntBASIC6.22□□□□□ -1.41
Sox3P53784 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sox3P53784 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sox3P53784 Gm23891-201ENSMUST00000158114 138 ntBASIC6.22□□□□□ -1.41
Sox3P53784 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC6.22□□□□□ -1.41
Sox3P53784 Gm7952-201ENSMUST00000180540 984 ntBASIC6.22□□□□□ -1.41
Sox3P53784 Gm7343-201ENSMUST00000194510 1061 ntBASIC6.22□□□□□ -1.41
Sox3P53784 Gm42580-201ENSMUST00000197223 753 ntBASIC6.22□□□□□ -1.41
Sox3P53784 AC153971.1-201ENSMUST00000215097 3811 ntBASIC6.22□□□□□ -1.41
Sox3P53784 Gm18586-201ENSMUST00000217265 518 ntBASIC6.22□□□□□ -1.41
Sox3P53784 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC6.22□□□□□ -1.41
Sox3P53784 AC166358.9-201ENSMUST00000220653 375 ntBASIC6.22□□□□□ -1.41
Sox3P53784 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC6.22□□□□□ -1.41
Sox3P53784 AC159205.4-201ENSMUST00000225964 704 ntBASIC6.22□□□□□ -1.41
Sox3P53784 AC154718.1-201ENSMUST00000226676 250 ntBASIC6.22□□□□□ -1.41
Sox3P53784 AC137950.3-201ENSMUST00000228250 246 ntBASIC6.22□□□□□ -1.41
Sox3P53784 Snora21-201ENSMUST00000082967 137 ntBASIC6.22□□□□□ -1.41
Sox3P53784 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sox3P53784 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC6.22□□□□□ -1.41
Sox3P53784 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sox3P53784 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sox3P53784 Gm43789-201ENSMUST00000199275 2472 ntBASIC6.22□□□□□ -1.41
Sox3P53784 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Sox3P53784 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sox3P53784 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Sox3P53784 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.22□□□□□ -1.41
Sox3P53784 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Sox3P53784 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC6.22□□□□□ -1.41
Sox3P53784 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sox3P53784 Gm43557-201ENSMUST00000197100 2370 ntBASIC6.22□□□□□ -1.41
Sox3P53784 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC6.22□□□□□ -1.41
Sox3P53784 Gm8872-201ENSMUST00000197475 1341 ntBASIC6.22□□□□□ -1.41
Sox3P53784 Gm44436-201ENSMUST00000204200 1494 ntBASIC6.22□□□□□ -1.41
Sox3P53784 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.21□□□□□ -1.41
Sox3P53784 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
Sox3P53784 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Sox3P53784 Gm28874-201ENSMUST00000190917 3134 ntBASIC6.21□□□□□ -1.41
Sox3P53784 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Sox3P53784 Gm37755-201ENSMUST00000195880 2179 ntBASIC6.21□□□□□ -1.41
Sox3P53784 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms