Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Sox1P53783 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC7.45□□□□□ -1.22
Sox1P53783 AC120375.2-202ENSMUST00000228722 397 ntBASIC7.45□□□□□ -1.22
Sox1P53783 Sun3-201ENSMUST00000043377 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Sox1P53783 Gm6863-201ENSMUST00000052882 636 ntBASIC7.45□□□□□ -1.22
Sox1P53783 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Sox1P53783 Gm8526-201ENSMUST00000079153 475 ntBASIC7.45□□□□□ -1.22
Sox1P53783 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC7.45□□□□□ -1.22
Sox1P53783 Olfr559-201ENSMUST00000084816 1022 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Sox1P53783 Tktl1-201ENSMUST00000010127 2473 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Sox1P53783 Gm42519-201ENSMUST00000199282 3656 ntBASIC7.45□□□□□ -1.22
Sox1P53783 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Sox1P53783 Tars2-203ENSMUST00000098857 3228 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Sox1P53783 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Sox1P53783 Celf2-221ENSMUST00000182706 2525 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Sox1P53783 F10-202ENSMUST00000063820 2503 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
Sox1P53783 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Sox1P53783 Gm33167-201ENSMUST00000201933 2643 ntBASIC7.45□□□□□ -1.22
Sox1P53783 Ap3m2-204ENSMUST00000210656 3373 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Sox1P53783 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC7.45□□□□□ -1.22
Sox1P53783 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Sox1P53783 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Sox1P53783 Ccnyl1-201ENSMUST00000094898 2923 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Sox1P53783 Dennd6a-205ENSMUST00000224378 2424 ntBASIC7.44□□□□□ -1.22
Sox1P53783 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Sox1P53783 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Sox1P53783 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Sox1P53783 Adam3-201ENSMUST00000033958 2743 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Sox1P53783 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Sox1P53783 Vmn1r51-204ENSMUST00000226977 4357 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Sox1P53783 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Sox1P53783 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Sox1P53783 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Sox1P53783 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Sox1P53783 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Sox1P53783 Gm20110-201ENSMUST00000218263 2095 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Sox1P53783 Gm13451-201ENSMUST00000117649 592 ntBASIC7.44□□□□□ -1.22
Sox1P53783 Gm15310-201ENSMUST00000117891 372 ntBASIC7.44□□□□□ -1.22
Sox1P53783 Gm15233-201ENSMUST00000118747 400 ntBASIC7.44□□□□□ -1.22
Sox1P53783 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC7.44□□□□□ -1.22
Sox1P53783 Gm12005-201ENSMUST00000121451 379 ntBASIC7.44□□□□□ -1.22
Sox1P53783 Gm13642-201ENSMUST00000121697 381 ntBASIC7.44□□□□□ -1.22
Sox1P53783 Sms-ps-201ENSMUST00000121773 1101 ntBASIC7.44□□□□□ -1.22
Sox1P53783 Gm25969-201ENSMUST00000157166 132 ntBASIC7.44□□□□□ -1.22
Sox1P53783 Gm8895-201ENSMUST00000172300 1223 ntBASIC7.44□□□□□ -1.22
Sox1P53783 Gm22990-201ENSMUST00000175427 89 ntBASIC7.44□□□□□ -1.22
Sox1P53783 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Sox1P53783 Gm4904-201ENSMUST00000178243 1195 ntBASIC7.44□□□□□ -1.22
Sox1P53783 Gm6223-201ENSMUST00000178436 871 ntBASIC7.44□□□□□ -1.22
Sox1P53783 Gm23145-201ENSMUST00000178912 79 ntBASIC7.44□□□□□ -1.22
Sox1P53783 Gm17048-201ENSMUST00000179266 847 ntBASIC7.44□□□□□ -1.22
Sox1P53783 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Sox1P53783 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Sox1P53783 Gm27034-201ENSMUST00000182552 940 ntBASIC7.44□□□□□ -1.22
Sox1P53783 Gm27315-201ENSMUST00000183977 154 ntBASIC7.44□□□□□ -1.22
Sox1P53783 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Sox1P53783 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC7.44□□□□□ -1.22
Sox1P53783 Gm38261-201ENSMUST00000192608 316 ntBASIC7.44□□□□□ -1.22
Sox1P53783 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC7.44□□□□□ -1.22
Sox1P53783 Gm5995-201ENSMUST00000204107 1273 ntBASIC7.44□□□□□ -1.22
Sox1P53783 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC7.44□□□□□ -1.22
Sox1P53783 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Sox1P53783 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC7.44□□□□□ -1.22
Sox1P53783 AC105958.1-201ENSMUST00000214783 2144 ntBASIC7.44□□□□□ -1.22
Sox1P53783 Gm19709-201ENSMUST00000215403 482 ntBASIC7.44□□□□□ -1.22
Sox1P53783 AC192091.1-201ENSMUST00000218668 439 ntBASIC7.44□□□□□ -1.22
Sox1P53783 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC7.44□□□□□ -1.22
Sox1P53783 Gm4012-201ENSMUST00000221504 581 ntBASIC7.44□□□□□ -1.22
Sox1P53783 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC7.44□□□□□ -1.22
Sox1P53783 AC161374.1-201ENSMUST00000224191 794 ntBASIC7.44□□□□□ -1.22
Sox1P53783 AC156790.3-201ENSMUST00000226200 254 ntBASIC7.44□□□□□ -1.22
Sox1P53783 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Sox1P53783 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Sox1P53783 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Sox1P53783 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Sox1P53783 Gm43800-201ENSMUST00000201868 2731 ntBASIC7.44□□□□□ -1.22
Sox1P53783 Tcf7l2-211ENSMUST00000111658 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Sox1P53783 B020014A21Rik-201ENSMUST00000217333 1938 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Sox1P53783 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC7.44□□□□□ -1.22
Sox1P53783 Gm43872-201ENSMUST00000203218 2213 ntBASIC7.44□□□□□ -1.22
Sox1P53783 Acsl1-203ENSMUST00000110372 3429 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Sox1P53783 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Sox1P53783 Umps-201ENSMUST00000023510 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Sox1P53783 Zkscan5-201ENSMUST00000031601 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Sox1P53783 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Sox1P53783 Cfl2-201ENSMUST00000078124 2940 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Sox1P53783 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Sox1P53783 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Sox1P53783 Cks1brt-201ENSMUST00000076896 2301 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Sox1P53783 Gm10600-201ENSMUST00000117202 2047 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Sox1P53783 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Sox1P53783 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Sox1P53783 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Sox1P53783 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Sox1P53783 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Sox1P53783 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Sox1P53783 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC7.43□□□□□ -1.22
Sox1P53783 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC7.43□□□□□ -1.22
Sox1P53783 Pla2g4d-201ENSMUST00000094665 3688 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Sox1P53783 Mir582-201ENSMUST00000103758 81 ntBASIC7.43□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms