Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.67■□□□□ 0.74
Nr1h3Q9Z0Y9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nr1h3Q9Z0Y9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nr1h3Q9Z0Y9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nr1h3Q9Z0Y9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nr1h3Q9Z0Y9 Zfp783-201ENSMUST00000095946 670 ntBASIC19.67■□□□□ 0.74
Nr1h3Q9Z0Y9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nr1h3Q9Z0Y9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Nr1h3Q9Z0Y9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.67■□□□□ 0.74
Nr1h3Q9Z0Y9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nr1h3Q9Z0Y9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Nr1h3Q9Z0Y9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.67■□□□□ 0.74
Nr1h3Q9Z0Y9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nr1h3Q9Z0Y9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nr1h3Q9Z0Y9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Nr1h3Q9Z0Y9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nr1h3Q9Z0Y9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nr1h3Q9Z0Y9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nr1h3Q9Z0Y9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nr1h3Q9Z0Y9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Nr1h3Q9Z0Y9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nr1h3Q9Z0Y9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Nr1h3Q9Z0Y9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nr1h3Q9Z0Y9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nr1h3Q9Z0Y9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nr1h3Q9Z0Y9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nr1h3Q9Z0Y9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nr1h3Q9Z0Y9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nr1h3Q9Z0Y9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nr1h3Q9Z0Y9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.65■□□□□ 0.74
Nr1h3Q9Z0Y9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Nr1h3Q9Z0Y9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nr1h3Q9Z0Y9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.65■□□□□ 0.74
Nr1h3Q9Z0Y9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nr1h3Q9Z0Y9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nr1h3Q9Z0Y9 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.65■□□□□ 0.74
Nr1h3Q9Z0Y9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nr1h3Q9Z0Y9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nr1h3Q9Z0Y9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nr1h3Q9Z0Y9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nr1h3Q9Z0Y9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nr1h3Q9Z0Y9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nr1h3Q9Z0Y9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Nr1h3Q9Z0Y9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Nr1h3Q9Z0Y9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nr1h3Q9Z0Y9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.64■□□□□ 0.73
Nr1h3Q9Z0Y9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.64■□□□□ 0.73
Nr1h3Q9Z0Y9 Gm10138-203ENSMUST00000206952 366 ntBASIC19.64■□□□□ 0.73
Nr1h3Q9Z0Y9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nr1h3Q9Z0Y9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nr1h3Q9Z0Y9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.64■□□□□ 0.73
Nr1h3Q9Z0Y9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.64■□□□□ 0.73
Nr1h3Q9Z0Y9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Nr1h3Q9Z0Y9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nr1h3Q9Z0Y9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Nr1h3Q9Z0Y9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nr1h3Q9Z0Y9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nr1h3Q9Z0Y9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nr1h3Q9Z0Y9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nr1h3Q9Z0Y9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nr1h3Q9Z0Y9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nr1h3Q9Z0Y9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Nr1h3Q9Z0Y9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nr1h3Q9Z0Y9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nr1h3Q9Z0Y9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nr1h3Q9Z0Y9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nr1h3Q9Z0Y9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nr1h3Q9Z0Y9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nr1h3Q9Z0Y9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nr1h3Q9Z0Y9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Nr1h3Q9Z0Y9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Nr1h3Q9Z0Y9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Nr1h3Q9Z0Y9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Nr1h3Q9Z0Y9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.62■□□□□ 0.73
Nr1h3Q9Z0Y9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Nr1h3Q9Z0Y9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Nr1h3Q9Z0Y9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Nr1h3Q9Z0Y9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.62■□□□□ 0.73
Nr1h3Q9Z0Y9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Nr1h3Q9Z0Y9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nr1h3Q9Z0Y9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.62■□□□□ 0.73
Nr1h3Q9Z0Y9 Mtag2-201ENSMUST00000058665 714 ntBASIC19.62■□□□□ 0.73
Nr1h3Q9Z0Y9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nr1h3Q9Z0Y9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nr1h3Q9Z0Y9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nr1h3Q9Z0Y9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nr1h3Q9Z0Y9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nr1h3Q9Z0Y9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nr1h3Q9Z0Y9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nr1h3Q9Z0Y9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nr1h3Q9Z0Y9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nr1h3Q9Z0Y9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nr1h3Q9Z0Y9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nr1h3Q9Z0Y9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nr1h3Q9Z0Y9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nr1h3Q9Z0Y9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.61■□□□□ 0.73
Nr1h3Q9Z0Y9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Nr1h3Q9Z0Y9 Mir5122-201ENSMUST00000175004 89 ntBASIC19.61■□□□□ 0.73
Nr1h3Q9Z0Y9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.61■□□□□ 0.73
Nr1h3Q9Z0Y9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms