Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.6■□□□□ 0.73
Trim54Q9ERP3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim54Q9ERP3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim54Q9ERP3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Trim54Q9ERP3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Trim54Q9ERP3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Trim54Q9ERP3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Trim54Q9ERP3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.6■□□□□ 0.73
Trim54Q9ERP3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Trim54Q9ERP3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Trim54Q9ERP3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Trim54Q9ERP3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim54Q9ERP3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.6■□□□□ 0.73
Trim54Q9ERP3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim54Q9ERP3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim54Q9ERP3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.6■□□□□ 0.73
Trim54Q9ERP3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.6■□□□□ 0.73
Trim54Q9ERP3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim54Q9ERP3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim54Q9ERP3 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.6■□□□□ 0.73
Trim54Q9ERP3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim54Q9ERP3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim54Q9ERP3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim54Q9ERP3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim54Q9ERP3 Gm15375-201ENSMUST00000119510 849 ntBASIC19.59■□□□□ 0.73
Trim54Q9ERP3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim54Q9ERP3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.59■□□□□ 0.73
Trim54Q9ERP3 Gm42545-201ENSMUST00000202755 922 ntBASIC19.59■□□□□ 0.73
Trim54Q9ERP3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim54Q9ERP3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim54Q9ERP3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Trim54Q9ERP3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim54Q9ERP3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Trim54Q9ERP3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim54Q9ERP3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Trim54Q9ERP3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim54Q9ERP3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Trim54Q9ERP3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim54Q9ERP3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.58■□□□□ 0.72
Trim54Q9ERP3 Gm18025-201ENSMUST00000221733 862 ntBASIC19.58■□□□□ 0.72
Trim54Q9ERP3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim54Q9ERP3 Gm5417-201ENSMUST00000079706 384 ntBASIC19.58■□□□□ 0.72
Trim54Q9ERP3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Trim54Q9ERP3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim54Q9ERP3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim54Q9ERP3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim54Q9ERP3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim54Q9ERP3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.58■□□□□ 0.72
Trim54Q9ERP3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim54Q9ERP3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim54Q9ERP3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim54Q9ERP3 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim54Q9ERP3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim54Q9ERP3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim54Q9ERP3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim54Q9ERP3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim54Q9ERP3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim54Q9ERP3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.57■□□□□ 0.72
Trim54Q9ERP3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.57■□□□□ 0.72
Trim54Q9ERP3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim54Q9ERP3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim54Q9ERP3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim54Q9ERP3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim54Q9ERP3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim54Q9ERP3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Trim54Q9ERP3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim54Q9ERP3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Trim54Q9ERP3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Trim54Q9ERP3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim54Q9ERP3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.57■□□□□ 0.72
Trim54Q9ERP3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim54Q9ERP3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim54Q9ERP3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim54Q9ERP3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Trim54Q9ERP3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim54Q9ERP3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim54Q9ERP3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.56■□□□□ 0.72
Trim54Q9ERP3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.56■□□□□ 0.72
Trim54Q9ERP3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim54Q9ERP3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim54Q9ERP3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim54Q9ERP3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim54Q9ERP3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim54Q9ERP3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim54Q9ERP3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim54Q9ERP3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim54Q9ERP3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.55■□□□□ 0.72
Trim54Q9ERP3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.55■□□□□ 0.72
Trim54Q9ERP3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim54Q9ERP3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Trim54Q9ERP3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim54Q9ERP3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim54Q9ERP3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim54Q9ERP3 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.55■□□□□ 0.72
Trim54Q9ERP3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim54Q9ERP3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.54■□□□□ 0.72
Trim54Q9ERP3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim54Q9ERP3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
Trim54Q9ERP3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim54Q9ERP3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms