Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
U2af1Q9D883 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
U2af1Q9D883 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
U2af1Q9D883 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
U2af1Q9D883 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
U2af1Q9D883 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
U2af1Q9D883 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
U2af1Q9D883 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC23.83■■□□□ 1.41
U2af1Q9D883 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
U2af1Q9D883 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
U2af1Q9D883 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
U2af1Q9D883 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
U2af1Q9D883 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC23.83■■□□□ 1.41
U2af1Q9D883 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
U2af1Q9D883 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
U2af1Q9D883 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
U2af1Q9D883 Gm10698-201ENSMUST00000182663 604 ntBASIC23.82■■□□□ 1.4
U2af1Q9D883 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC23.82■■□□□ 1.4
U2af1Q9D883 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
U2af1Q9D883 Gm43213-201ENSMUST00000151866 1790 ntBASIC23.82■■□□□ 1.4
U2af1Q9D883 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
U2af1Q9D883 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
U2af1Q9D883 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
U2af1Q9D883 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
U2af1Q9D883 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
U2af1Q9D883 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
U2af1Q9D883 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC23.81■■□□□ 1.4
U2af1Q9D883 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
U2af1Q9D883 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
U2af1Q9D883 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC23.81■■□□□ 1.4
U2af1Q9D883 H2-K2-201ENSMUST00000174250 1049 ntBASIC23.81■■□□□ 1.4
U2af1Q9D883 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC23.81■■□□□ 1.4
U2af1Q9D883 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC23.81■■□□□ 1.4
U2af1Q9D883 Gm10812-201ENSMUST00000099864 546 ntBASIC23.81■■□□□ 1.4
U2af1Q9D883 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
U2af1Q9D883 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
U2af1Q9D883 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
U2af1Q9D883 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
U2af1Q9D883 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
U2af1Q9D883 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
U2af1Q9D883 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
U2af1Q9D883 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC23.8■■□□□ 1.4
U2af1Q9D883 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
U2af1Q9D883 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC23.8■■□□□ 1.4
U2af1Q9D883 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
U2af1Q9D883 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
U2af1Q9D883 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
U2af1Q9D883 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
U2af1Q9D883 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
U2af1Q9D883 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
U2af1Q9D883 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC23.8■■□□□ 1.4
U2af1Q9D883 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
U2af1Q9D883 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
U2af1Q9D883 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC23.79■■□□□ 1.4
U2af1Q9D883 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC23.79■■□□□ 1.4
U2af1Q9D883 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC23.79■■□□□ 1.4
U2af1Q9D883 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
U2af1Q9D883 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC23.78■■□□□ 1.4
U2af1Q9D883 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
U2af1Q9D883 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
U2af1Q9D883 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
U2af1Q9D883 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
U2af1Q9D883 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
U2af1Q9D883 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC23.78■■□□□ 1.4
U2af1Q9D883 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
U2af1Q9D883 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
U2af1Q9D883 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
U2af1Q9D883 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
U2af1Q9D883 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
U2af1Q9D883 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
U2af1Q9D883 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
U2af1Q9D883 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
U2af1Q9D883 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
U2af1Q9D883 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
U2af1Q9D883 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
U2af1Q9D883 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
U2af1Q9D883 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
U2af1Q9D883 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
U2af1Q9D883 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
U2af1Q9D883 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC23.77■■□□□ 1.4
U2af1Q9D883 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC23.77■■□□□ 1.4
U2af1Q9D883 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
U2af1Q9D883 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
U2af1Q9D883 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
U2af1Q9D883 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
U2af1Q9D883 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
U2af1Q9D883 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
U2af1Q9D883 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
U2af1Q9D883 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC23.76■■□□□ 1.39
U2af1Q9D883 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
U2af1Q9D883 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
U2af1Q9D883 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
U2af1Q9D883 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
U2af1Q9D883 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
U2af1Q9D883 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
U2af1Q9D883 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
U2af1Q9D883 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
U2af1Q9D883 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
U2af1Q9D883 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
U2af1Q9D883 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms