Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssr1Q9CY50 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssr1Q9CY50 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Ssr1Q9CY50 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.61■□□□□ 0.73
Ssr1Q9CY50 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.61■□□□□ 0.73
Ssr1Q9CY50 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.61■□□□□ 0.73
Ssr1Q9CY50 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.61■□□□□ 0.73
Ssr1Q9CY50 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssr1Q9CY50 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssr1Q9CY50 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssr1Q9CY50 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssr1Q9CY50 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssr1Q9CY50 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssr1Q9CY50 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssr1Q9CY50 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssr1Q9CY50 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ssr1Q9CY50 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ssr1Q9CY50 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ssr1Q9CY50 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ssr1Q9CY50 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Ssr1Q9CY50 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ssr1Q9CY50 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.6■□□□□ 0.73
Ssr1Q9CY50 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ssr1Q9CY50 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ssr1Q9CY50 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ssr1Q9CY50 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.6■□□□□ 0.73
Ssr1Q9CY50 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.6■□□□□ 0.73
Ssr1Q9CY50 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
Ssr1Q9CY50 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ssr1Q9CY50 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.6■□□□□ 0.73
Ssr1Q9CY50 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Ssr1Q9CY50 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ssr1Q9CY50 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ssr1Q9CY50 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ssr1Q9CY50 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ssr1Q9CY50 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.6■□□□□ 0.73
Ssr1Q9CY50 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ssr1Q9CY50 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ssr1Q9CY50 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ssr1Q9CY50 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ssr1Q9CY50 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ssr1Q9CY50 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ssr1Q9CY50 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ssr1Q9CY50 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ssr1Q9CY50 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ssr1Q9CY50 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ssr1Q9CY50 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ssr1Q9CY50 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ssr1Q9CY50 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ssr1Q9CY50 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ssr1Q9CY50 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ssr1Q9CY50 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ssr1Q9CY50 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ssr1Q9CY50 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ssr1Q9CY50 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ssr1Q9CY50 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ssr1Q9CY50 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ssr1Q9CY50 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ssr1Q9CY50 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ssr1Q9CY50 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ssr1Q9CY50 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ssr1Q9CY50 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ssr1Q9CY50 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
Ssr1Q9CY50 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.58■□□□□ 0.72
Ssr1Q9CY50 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.58■□□□□ 0.72
Ssr1Q9CY50 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ssr1Q9CY50 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ssr1Q9CY50 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ssr1Q9CY50 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ssr1Q9CY50 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ssr1Q9CY50 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Ssr1Q9CY50 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ssr1Q9CY50 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ssr1Q9CY50 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ssr1Q9CY50 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ssr1Q9CY50 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ssr1Q9CY50 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ssr1Q9CY50 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ssr1Q9CY50 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.57■□□□□ 0.72
Ssr1Q9CY50 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssr1Q9CY50 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ssr1Q9CY50 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Ssr1Q9CY50 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssr1Q9CY50 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.57■□□□□ 0.72
Ssr1Q9CY50 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.57■□□□□ 0.72
Ssr1Q9CY50 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Ssr1Q9CY50 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.57■□□□□ 0.72
Ssr1Q9CY50 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssr1Q9CY50 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssr1Q9CY50 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssr1Q9CY50 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssr1Q9CY50 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Ssr1Q9CY50 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssr1Q9CY50 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssr1Q9CY50 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssr1Q9CY50 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
Ssr1Q9CY50 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssr1Q9CY50 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.56■□□□□ 0.72
Ssr1Q9CY50 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssr1Q9CY50 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms