Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Otud1Q9CUB6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.11■□□□□ 0.33
Otud1Q9CUB6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.11■□□□□ 0.33
Otud1Q9CUB6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Otud1Q9CUB6 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Otud1Q9CUB6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Otud1Q9CUB6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.11■□□□□ 0.33
Otud1Q9CUB6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Otud1Q9CUB6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Otud1Q9CUB6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Otud1Q9CUB6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Otud1Q9CUB6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Otud1Q9CUB6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Otud1Q9CUB6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Otud1Q9CUB6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Otud1Q9CUB6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Otud1Q9CUB6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.1■□□□□ 0.33
Otud1Q9CUB6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Otud1Q9CUB6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Otud1Q9CUB6 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Otud1Q9CUB6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.1■□□□□ 0.33
Otud1Q9CUB6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Otud1Q9CUB6 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.1■□□□□ 0.33
Otud1Q9CUB6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Otud1Q9CUB6 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Otud1Q9CUB6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Otud1Q9CUB6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Otud1Q9CUB6 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Otud1Q9CUB6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.09■□□□□ 0.33
Otud1Q9CUB6 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.09■□□□□ 0.33
Otud1Q9CUB6 Gm18666-201ENSMUST00000190039 958 ntBASIC17.09■□□□□ 0.33
Otud1Q9CUB6 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.09■□□□□ 0.33
Otud1Q9CUB6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.09■□□□□ 0.33
Otud1Q9CUB6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Otud1Q9CUB6 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Otud1Q9CUB6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Otud1Q9CUB6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Otud1Q9CUB6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Otud1Q9CUB6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Otud1Q9CUB6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Otud1Q9CUB6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Otud1Q9CUB6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Otud1Q9CUB6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.08■□□□□ 0.33
Otud1Q9CUB6 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.08■□□□□ 0.32
Otud1Q9CUB6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Otud1Q9CUB6 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.08■□□□□ 0.32
Otud1Q9CUB6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Otud1Q9CUB6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Otud1Q9CUB6 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.08■□□□□ 0.32
Otud1Q9CUB6 Gm38285-201ENSMUST00000192928 922 ntBASIC17.08■□□□□ 0.32
Otud1Q9CUB6 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.08■□□□□ 0.32
Otud1Q9CUB6 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Otud1Q9CUB6 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Otud1Q9CUB6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Otud1Q9CUB6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Otud1Q9CUB6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Otud1Q9CUB6 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Otud1Q9CUB6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Otud1Q9CUB6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Otud1Q9CUB6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Otud1Q9CUB6 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Otud1Q9CUB6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Otud1Q9CUB6 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.07■□□□□ 0.32
Otud1Q9CUB6 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Otud1Q9CUB6 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Otud1Q9CUB6 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Otud1Q9CUB6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Otud1Q9CUB6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Otud1Q9CUB6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Otud1Q9CUB6 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Otud1Q9CUB6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Otud1Q9CUB6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Otud1Q9CUB6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Otud1Q9CUB6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Otud1Q9CUB6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Otud1Q9CUB6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Otud1Q9CUB6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Otud1Q9CUB6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Otud1Q9CUB6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Otud1Q9CUB6 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Otud1Q9CUB6 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.06■□□□□ 0.32
Otud1Q9CUB6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.06■□□□□ 0.32
Otud1Q9CUB6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Otud1Q9CUB6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Otud1Q9CUB6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Otud1Q9CUB6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Otud1Q9CUB6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Otud1Q9CUB6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Otud1Q9CUB6 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Otud1Q9CUB6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Otud1Q9CUB6 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.05■□□□□ 0.32
Otud1Q9CUB6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Otud1Q9CUB6 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.05■□□□□ 0.32
Otud1Q9CUB6 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.05■□□□□ 0.32
Otud1Q9CUB6 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.05■□□□□ 0.32
Otud1Q9CUB6 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Otud1Q9CUB6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Otud1Q9CUB6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Otud1Q9CUB6 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Otud1Q9CUB6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms