Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retreg3Q9CQV4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retreg3Q9CQV4 Gm18558-201ENSMUST00000186253 1214 ntBASIC18.22■□□□□ 0.51
Retreg3Q9CQV4 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
Retreg3Q9CQV4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.22■□□□□ 0.51
Retreg3Q9CQV4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Retreg3Q9CQV4 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retreg3Q9CQV4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.22■□□□□ 0.51
Retreg3Q9CQV4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.22■□□□□ 0.51
Retreg3Q9CQV4 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retreg3Q9CQV4 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retreg3Q9CQV4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Retreg3Q9CQV4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg3Q9CQV4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg3Q9CQV4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Retreg3Q9CQV4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Retreg3Q9CQV4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg3Q9CQV4 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.21■□□□□ 0.51
Retreg3Q9CQV4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Retreg3Q9CQV4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg3Q9CQV4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.21■□□□□ 0.51
Retreg3Q9CQV4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.21■□□□□ 0.51
Retreg3Q9CQV4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg3Q9CQV4 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg3Q9CQV4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg3Q9CQV4 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Retreg3Q9CQV4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg3Q9CQV4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg3Q9CQV4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg3Q9CQV4 Tgds-204ENSMUST00000228543 1594 ntBASIC18.21■□□□□ 0.51
Retreg3Q9CQV4 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg3Q9CQV4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg3Q9CQV4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Retreg3Q9CQV4 Gm10252-201ENSMUST00000209541 832 ntBASIC18.2■□□□□ 0.5
Retreg3Q9CQV4 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg3Q9CQV4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg3Q9CQV4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg3Q9CQV4 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg3Q9CQV4 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg3Q9CQV4 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg3Q9CQV4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg3Q9CQV4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Retreg3Q9CQV4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg3Q9CQV4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg3Q9CQV4 Grk6-206ENSMUST00000224995 2971 ntBASIC18.2■□□□□ 0.5
Retreg3Q9CQV4 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg3Q9CQV4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Retreg3Q9CQV4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Retreg3Q9CQV4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg3Q9CQV4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg3Q9CQV4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg3Q9CQV4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg3Q9CQV4 Gm13323-201ENSMUST00000120245 1151 ntBASIC18.19■□□□□ 0.5
Retreg3Q9CQV4 Gm13168-201ENSMUST00000121771 632 ntBASIC18.19■□□□□ 0.5
Retreg3Q9CQV4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.19■□□□□ 0.5
Retreg3Q9CQV4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.19■□□□□ 0.5
Retreg3Q9CQV4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg3Q9CQV4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg3Q9CQV4 Gm25007-201ENSMUST00000083808 133 ntBASIC18.19■□□□□ 0.5
Retreg3Q9CQV4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg3Q9CQV4 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg3Q9CQV4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg3Q9CQV4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Retreg3Q9CQV4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg3Q9CQV4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg3Q9CQV4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg3Q9CQV4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Retreg3Q9CQV4 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg3Q9CQV4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Retreg3Q9CQV4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg3Q9CQV4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Retreg3Q9CQV4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg3Q9CQV4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.18■□□□□ 0.5
Retreg3Q9CQV4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg3Q9CQV4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg3Q9CQV4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg3Q9CQV4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Retreg3Q9CQV4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg3Q9CQV4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg3Q9CQV4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.17■□□□□ 0.5
Retreg3Q9CQV4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg3Q9CQV4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg3Q9CQV4 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg3Q9CQV4 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg3Q9CQV4 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg3Q9CQV4 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.17■□□□□ 0.5
Retreg3Q9CQV4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.17■□□□□ 0.5
Retreg3Q9CQV4 Gm45691-201ENSMUST00000206905 1120 ntBASIC18.17■□□□□ 0.5
Retreg3Q9CQV4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Retreg3Q9CQV4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg3Q9CQV4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg3Q9CQV4 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg3Q9CQV4 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg3Q9CQV4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg3Q9CQV4 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.17■□□□□ 0.5
Retreg3Q9CQV4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg3Q9CQV4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg3Q9CQV4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg3Q9CQV4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg3Q9CQV4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms