Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Raf1Q99N57 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Raf1Q99N57 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Raf1Q99N57 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Raf1Q99N57 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Raf1Q99N57 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.23■□□□□ 0.19
Raf1Q99N57 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Raf1Q99N57 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Raf1Q99N57 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.23■□□□□ 0.19
Raf1Q99N57 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.23■□□□□ 0.19
Raf1Q99N57 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Raf1Q99N57 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Raf1Q99N57 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Raf1Q99N57 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Raf1Q99N57 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Raf1Q99N57 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Raf1Q99N57 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.23■□□□□ 0.19
Raf1Q99N57 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Raf1Q99N57 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Raf1Q99N57 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Raf1Q99N57 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Raf1Q99N57 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Raf1Q99N57 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Raf1Q99N57 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Raf1Q99N57 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Raf1Q99N57 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Raf1Q99N57 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Raf1Q99N57 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.22■□□□□ 0.19
Raf1Q99N57 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Raf1Q99N57 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.22■□□□□ 0.19
Raf1Q99N57 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.22■□□□□ 0.19
Raf1Q99N57 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Raf1Q99N57 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Raf1Q99N57 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Raf1Q99N57 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Raf1Q99N57 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Raf1Q99N57 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Raf1Q99N57 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Raf1Q99N57 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Raf1Q99N57 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Raf1Q99N57 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Raf1Q99N57 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.21■□□□□ 0.19
Raf1Q99N57 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Raf1Q99N57 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Raf1Q99N57 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Raf1Q99N57 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Raf1Q99N57 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Raf1Q99N57 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.21■□□□□ 0.19
Raf1Q99N57 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Raf1Q99N57 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Raf1Q99N57 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Raf1Q99N57 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.21■□□□□ 0.19
Raf1Q99N57 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Raf1Q99N57 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Raf1Q99N57 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Raf1Q99N57 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Raf1Q99N57 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Raf1Q99N57 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Raf1Q99N57 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.2■□□□□ 0.18
Raf1Q99N57 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Raf1Q99N57 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.2■□□□□ 0.18
Raf1Q99N57 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Raf1Q99N57 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.2■□□□□ 0.18
Raf1Q99N57 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.2■□□□□ 0.18
Raf1Q99N57 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Raf1Q99N57 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Raf1Q99N57 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.2■□□□□ 0.18
Raf1Q99N57 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Raf1Q99N57 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Raf1Q99N57 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Raf1Q99N57 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Raf1Q99N57 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Raf1Q99N57 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Raf1Q99N57 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Raf1Q99N57 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Raf1Q99N57 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Raf1Q99N57 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Raf1Q99N57 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Raf1Q99N57 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Raf1Q99N57 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Raf1Q99N57 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Raf1Q99N57 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Raf1Q99N57 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Raf1Q99N57 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Raf1Q99N57 Gm12933-201ENSMUST00000120203 872 ntBASIC16.18■□□□□ 0.18
Raf1Q99N57 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Raf1Q99N57 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.18■□□□□ 0.18
Raf1Q99N57 Gm9988-201ENSMUST00000069786 435 ntBASIC16.18■□□□□ 0.18
Raf1Q99N57 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Raf1Q99N57 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Raf1Q99N57 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Raf1Q99N57 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Raf1Q99N57 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Raf1Q99N57 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Raf1Q99N57 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Raf1Q99N57 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Raf1Q99N57 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.18■□□□□ 0.18
Raf1Q99N57 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Raf1Q99N57 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Raf1Q99N57 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms