Protein–RNA interactions for Protein: Q99JY4

Trabd, TraB domain-containing protein, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TrabdQ99JY4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TrabdQ99JY4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TrabdQ99JY4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
TrabdQ99JY4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TrabdQ99JY4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TrabdQ99JY4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TrabdQ99JY4 Gm15375-201ENSMUST00000119510 849 ntBASIC18.86■□□□□ 0.61
TrabdQ99JY4 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.86■□□□□ 0.61
TrabdQ99JY4 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.86■□□□□ 0.61
TrabdQ99JY4 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TrabdQ99JY4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TrabdQ99JY4 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TrabdQ99JY4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TrabdQ99JY4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TrabdQ99JY4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.85■□□□□ 0.61
TrabdQ99JY4 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TrabdQ99JY4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TrabdQ99JY4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TrabdQ99JY4 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.85■□□□□ 0.61
TrabdQ99JY4 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TrabdQ99JY4 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TrabdQ99JY4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TrabdQ99JY4 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TrabdQ99JY4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TrabdQ99JY4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TrabdQ99JY4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TrabdQ99JY4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TrabdQ99JY4 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TrabdQ99JY4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TrabdQ99JY4 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TrabdQ99JY4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TrabdQ99JY4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TrabdQ99JY4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TrabdQ99JY4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TrabdQ99JY4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.84■□□□□ 0.61
TrabdQ99JY4 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.84■□□□□ 0.61
TrabdQ99JY4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TrabdQ99JY4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TrabdQ99JY4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TrabdQ99JY4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TrabdQ99JY4 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TrabdQ99JY4 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TrabdQ99JY4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TrabdQ99JY4 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TrabdQ99JY4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TrabdQ99JY4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TrabdQ99JY4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TrabdQ99JY4 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TrabdQ99JY4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TrabdQ99JY4 Mir6349-201ENSMUST00000184059 97 ntBASIC18.83■□□□□ 0.6
TrabdQ99JY4 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TrabdQ99JY4 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.83■□□□□ 0.6
TrabdQ99JY4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.83■□□□□ 0.6
TrabdQ99JY4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TrabdQ99JY4 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TrabdQ99JY4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TrabdQ99JY4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
TrabdQ99JY4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TrabdQ99JY4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TrabdQ99JY4 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.82■□□□□ 0.6
TrabdQ99JY4 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TrabdQ99JY4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TrabdQ99JY4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.82■□□□□ 0.6
TrabdQ99JY4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TrabdQ99JY4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TrabdQ99JY4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TrabdQ99JY4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TrabdQ99JY4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.82■□□□□ 0.6
TrabdQ99JY4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TrabdQ99JY4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TrabdQ99JY4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TrabdQ99JY4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TrabdQ99JY4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
TrabdQ99JY4 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TrabdQ99JY4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TrabdQ99JY4 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TrabdQ99JY4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TrabdQ99JY4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.81■□□□□ 0.6
TrabdQ99JY4 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TrabdQ99JY4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TrabdQ99JY4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TrabdQ99JY4 Mir1199-201ENSMUST00000117015 119 ntBASIC18.81■□□□□ 0.6
TrabdQ99JY4 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TrabdQ99JY4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TrabdQ99JY4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
TrabdQ99JY4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.81■□□□□ 0.6
TrabdQ99JY4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.81■□□□□ 0.6
TrabdQ99JY4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TrabdQ99JY4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TrabdQ99JY4 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TrabdQ99JY4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TrabdQ99JY4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.8■□□□□ 0.6
TrabdQ99JY4 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TrabdQ99JY4 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.8■□□□□ 0.6
TrabdQ99JY4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TrabdQ99JY4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TrabdQ99JY4 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TrabdQ99JY4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TrabdQ99JY4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TrabdQ99JY4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms