Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb3Q91XZ7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb3Q91XZ7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb3Q91XZ7 Smad6-203ENSMUST00000179458 273 ntBASIC18.08■□□□□ 0.48
Pcdhb3Q91XZ7 Gm5874-201ENSMUST00000096101 508 ntBASIC18.08■□□□□ 0.48
Pcdhb3Q91XZ7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb3Q91XZ7 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb3Q91XZ7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb3Q91XZ7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhb3Q91XZ7 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb3Q91XZ7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb3Q91XZ7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb3Q91XZ7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb3Q91XZ7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb3Q91XZ7 Gm42790-201ENSMUST00000201268 969 ntBASIC18.07■□□□□ 0.48
Pcdhb3Q91XZ7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhb3Q91XZ7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhb3Q91XZ7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb3Q91XZ7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb3Q91XZ7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhb3Q91XZ7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhb3Q91XZ7 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhb3Q91XZ7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb3Q91XZ7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb3Q91XZ7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb3Q91XZ7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb3Q91XZ7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb3Q91XZ7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb3Q91XZ7 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb3Q91XZ7 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.06■□□□□ 0.48
Pcdhb3Q91XZ7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb3Q91XZ7 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb3Q91XZ7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb3Q91XZ7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Pcdhb3Q91XZ7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Pcdhb3Q91XZ7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.06■□□□□ 0.48
Pcdhb3Q91XZ7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb3Q91XZ7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb3Q91XZ7 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb3Q91XZ7 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdhb3Q91XZ7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb3Q91XZ7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.06■□□□□ 0.48
Pcdhb3Q91XZ7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdhb3Q91XZ7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb3Q91XZ7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb3Q91XZ7 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb3Q91XZ7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb3Q91XZ7 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb3Q91XZ7 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Pcdhb3Q91XZ7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.05■□□□□ 0.48
Pcdhb3Q91XZ7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb3Q91XZ7 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.05■□□□□ 0.48
Pcdhb3Q91XZ7 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.05■□□□□ 0.48
Pcdhb3Q91XZ7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhb3Q91XZ7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb3Q91XZ7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb3Q91XZ7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhb3Q91XZ7 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhb3Q91XZ7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb3Q91XZ7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb3Q91XZ7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb3Q91XZ7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb3Q91XZ7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb3Q91XZ7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb3Q91XZ7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdhb3Q91XZ7 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb3Q91XZ7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb3Q91XZ7 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdhb3Q91XZ7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb3Q91XZ7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb3Q91XZ7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhb3Q91XZ7 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb3Q91XZ7 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb3Q91XZ7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb3Q91XZ7 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdhb3Q91XZ7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhb3Q91XZ7 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.04■□□□□ 0.48
Pcdhb3Q91XZ7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb3Q91XZ7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.04■□□□□ 0.48
Pcdhb3Q91XZ7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.04■□□□□ 0.48
Pcdhb3Q91XZ7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb3Q91XZ7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb3Q91XZ7 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Pcdhb3Q91XZ7 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb3Q91XZ7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb3Q91XZ7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb3Q91XZ7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb3Q91XZ7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb3Q91XZ7 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.04■□□□□ 0.48
Pcdhb3Q91XZ7 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb3Q91XZ7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb3Q91XZ7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb3Q91XZ7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb3Q91XZ7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb3Q91XZ7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb3Q91XZ7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb3Q91XZ7 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb3Q91XZ7 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb3Q91XZ7 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb3Q91XZ7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms