Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb4Q91XZ6 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb4Q91XZ6 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb4Q91XZ6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhb4Q91XZ6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdhb4Q91XZ6 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb4Q91XZ6 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb4Q91XZ6 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb4Q91XZ6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb4Q91XZ6 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Pcdhb4Q91XZ6 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.97■□□□□ 0.47
Pcdhb4Q91XZ6 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.97■□□□□ 0.47
Pcdhb4Q91XZ6 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.97■□□□□ 0.47
Pcdhb4Q91XZ6 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb4Q91XZ6 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb4Q91XZ6 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb4Q91XZ6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb4Q91XZ6 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb4Q91XZ6 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb4Q91XZ6 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb4Q91XZ6 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb4Q91XZ6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb4Q91XZ6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb4Q91XZ6 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb4Q91XZ6 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb4Q91XZ6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb4Q91XZ6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb4Q91XZ6 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb4Q91XZ6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb4Q91XZ6 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb4Q91XZ6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdhb4Q91XZ6 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.96■□□□□ 0.47
Pcdhb4Q91XZ6 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb4Q91XZ6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Pcdhb4Q91XZ6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdhb4Q91XZ6 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Pcdhb4Q91XZ6 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb4Q91XZ6 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb4Q91XZ6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdhb4Q91XZ6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Pcdhb4Q91XZ6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdhb4Q91XZ6 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Pcdhb4Q91XZ6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb4Q91XZ6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb4Q91XZ6 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb4Q91XZ6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pcdhb4Q91XZ6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pcdhb4Q91XZ6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.95■□□□□ 0.46
Pcdhb4Q91XZ6 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.95■□□□□ 0.46
Pcdhb4Q91XZ6 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Pcdhb4Q91XZ6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb4Q91XZ6 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb4Q91XZ6 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb4Q91XZ6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb4Q91XZ6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb4Q91XZ6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb4Q91XZ6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Pcdhb4Q91XZ6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb4Q91XZ6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb4Q91XZ6 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb4Q91XZ6 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb4Q91XZ6 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.94■□□□□ 0.46
Pcdhb4Q91XZ6 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb4Q91XZ6 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb4Q91XZ6 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.94■□□□□ 0.46
Pcdhb4Q91XZ6 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb4Q91XZ6 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb4Q91XZ6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Pcdhb4Q91XZ6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb4Q91XZ6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb4Q91XZ6 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb4Q91XZ6 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb4Q91XZ6 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.93■□□□□ 0.46
Pcdhb4Q91XZ6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb4Q91XZ6 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb4Q91XZ6 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.93■□□□□ 0.46
Pcdhb4Q91XZ6 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.93■□□□□ 0.46
Pcdhb4Q91XZ6 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb4Q91XZ6 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb4Q91XZ6 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb4Q91XZ6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdhb4Q91XZ6 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb4Q91XZ6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb4Q91XZ6 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb4Q91XZ6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhb4Q91XZ6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb4Q91XZ6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb4Q91XZ6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb4Q91XZ6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb4Q91XZ6 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb4Q91XZ6 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.93■□□□□ 0.46
Pcdhb4Q91XZ6 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.92■□□□□ 0.46
Pcdhb4Q91XZ6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb4Q91XZ6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb4Q91XZ6 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Pcdhb4Q91XZ6 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb4Q91XZ6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Pcdhb4Q91XZ6 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.92■□□□□ 0.46
Pcdhb4Q91XZ6 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb4Q91XZ6 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms