Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Pcdhgb5Q91XX5 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Pcdhgb5Q91XX5 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Pcdhgb5Q91XX5 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18■□□□□ 0.47
Pcdhgb5Q91XX5 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18■□□□□ 0.47
Pcdhgb5Q91XX5 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Pcdhgb5Q91XX5 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18■□□□□ 0.47
Pcdhgb5Q91XX5 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Pcdhgb5Q91XX5 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Pcdhgb5Q91XX5 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18■□□□□ 0.47
Pcdhgb5Q91XX5 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb5Q91XX5 Gm45560-201ENSMUST00000211492 1472 ntBASIC18■□□□□ 0.47
Pcdhgb5Q91XX5 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb5Q91XX5 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb5Q91XX5 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb5Q91XX5 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pcdhgb5Q91XX5 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb5Q91XX5 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb5Q91XX5 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb5Q91XX5 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb5Q91XX5 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb5Q91XX5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb5Q91XX5 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhgb5Q91XX5 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb5Q91XX5 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Pcdhgb5Q91XX5 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb5Q91XX5 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb5Q91XX5 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb5Q91XX5 Mir6349-201ENSMUST00000184059 97 ntBASIC17.99■□□□□ 0.47
Pcdhgb5Q91XX5 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcdhgb5Q91XX5 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.99■□□□□ 0.47
Pcdhgb5Q91XX5 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb5Q91XX5 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb5Q91XX5 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb5Q91XX5 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.99■□□□□ 0.47
Pcdhgb5Q91XX5 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb5Q91XX5 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhgb5Q91XX5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Pcdhgb5Q91XX5 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb5Q91XX5 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdhgb5Q91XX5 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb5Q91XX5 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb5Q91XX5 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb5Q91XX5 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb5Q91XX5 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb5Q91XX5 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb5Q91XX5 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.98■□□□□ 0.47
Pcdhgb5Q91XX5 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb5Q91XX5 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb5Q91XX5 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb5Q91XX5 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb5Q91XX5 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhgb5Q91XX5 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhgb5Q91XX5 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgb5Q91XX5 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgb5Q91XX5 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgb5Q91XX5 Gm12382-201ENSMUST00000122005 922 ntBASIC17.97■□□□□ 0.47
Pcdhgb5Q91XX5 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgb5Q91XX5 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.97■□□□□ 0.47
Pcdhgb5Q91XX5 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgb5Q91XX5 Gm42545-201ENSMUST00000202755 922 ntBASIC17.97■□□□□ 0.47
Pcdhgb5Q91XX5 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.97■□□□□ 0.47
Pcdhgb5Q91XX5 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Pcdhgb5Q91XX5 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgb5Q91XX5 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgb5Q91XX5 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhgb5Q91XX5 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgb5Q91XX5 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb5Q91XX5 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Pcdhgb5Q91XX5 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.96■□□□□ 0.47
Pcdhgb5Q91XX5 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdhgb5Q91XX5 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Pcdhgb5Q91XX5 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb5Q91XX5 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb5Q91XX5 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb5Q91XX5 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb5Q91XX5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb5Q91XX5 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb5Q91XX5 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb5Q91XX5 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb5Q91XX5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Pcdhgb5Q91XX5 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgb5Q91XX5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhgb5Q91XX5 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhgb5Q91XX5 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhgb5Q91XX5 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhgb5Q91XX5 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhgb5Q91XX5 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhgb5Q91XX5 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhgb5Q91XX5 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhgb5Q91XX5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhgb5Q91XX5 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Pcdhgb5Q91XX5 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.95■□□□□ 0.46
Pcdhgb5Q91XX5 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.95■□□□□ 0.46
Pcdhgb5Q91XX5 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhgb5Q91XX5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Pcdhgb5Q91XX5 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhgb5Q91XX5 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.94■□□□□ 0.46
Pcdhgb5Q91XX5 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.94■□□□□ 0.46
Pcdhgb5Q91XX5 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms