Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TraipQ8VIG6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.3■□□□□ 0.68
TraipQ8VIG6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TraipQ8VIG6 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
TraipQ8VIG6 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TraipQ8VIG6 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TraipQ8VIG6 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TraipQ8VIG6 Mir7071-201ENSMUST00000184847 69 ntBASIC19.3■□□□□ 0.68
TraipQ8VIG6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TraipQ8VIG6 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TraipQ8VIG6 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TraipQ8VIG6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TraipQ8VIG6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TraipQ8VIG6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TraipQ8VIG6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TraipQ8VIG6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TraipQ8VIG6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
TraipQ8VIG6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TraipQ8VIG6 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TraipQ8VIG6 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TraipQ8VIG6 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TraipQ8VIG6 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TraipQ8VIG6 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TraipQ8VIG6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TraipQ8VIG6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TraipQ8VIG6 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TraipQ8VIG6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TraipQ8VIG6 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TraipQ8VIG6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.29■□□□□ 0.68
TraipQ8VIG6 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TraipQ8VIG6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TraipQ8VIG6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TraipQ8VIG6 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TraipQ8VIG6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.28■□□□□ 0.68
TraipQ8VIG6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TraipQ8VIG6 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
TraipQ8VIG6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.28■□□□□ 0.68
TraipQ8VIG6 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.28■□□□□ 0.68
TraipQ8VIG6 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TraipQ8VIG6 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TraipQ8VIG6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TraipQ8VIG6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.28■□□□□ 0.68
TraipQ8VIG6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TraipQ8VIG6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TraipQ8VIG6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TraipQ8VIG6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TraipQ8VIG6 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TraipQ8VIG6 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TraipQ8VIG6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TraipQ8VIG6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TraipQ8VIG6 Gm12382-201ENSMUST00000122005 922 ntBASIC19.27■□□□□ 0.68
TraipQ8VIG6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.27■□□□□ 0.68
TraipQ8VIG6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TraipQ8VIG6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TraipQ8VIG6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TraipQ8VIG6 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TraipQ8VIG6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TraipQ8VIG6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TraipQ8VIG6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TraipQ8VIG6 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TraipQ8VIG6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TraipQ8VIG6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TraipQ8VIG6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TraipQ8VIG6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TraipQ8VIG6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TraipQ8VIG6 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.26■□□□□ 0.67
TraipQ8VIG6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TraipQ8VIG6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TraipQ8VIG6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TraipQ8VIG6 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.26■□□□□ 0.67
TraipQ8VIG6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TraipQ8VIG6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TraipQ8VIG6 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TraipQ8VIG6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TraipQ8VIG6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TraipQ8VIG6 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TraipQ8VIG6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.25■□□□□ 0.67
TraipQ8VIG6 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TraipQ8VIG6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TraipQ8VIG6 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.25■□□□□ 0.67
TraipQ8VIG6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TraipQ8VIG6 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TraipQ8VIG6 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TraipQ8VIG6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TraipQ8VIG6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TraipQ8VIG6 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TraipQ8VIG6 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.25■□□□□ 0.67
TraipQ8VIG6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TraipQ8VIG6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
TraipQ8VIG6 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TraipQ8VIG6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.24■□□□□ 0.67
TraipQ8VIG6 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.24■□□□□ 0.67
TraipQ8VIG6 Timm23-208ENSMUST00000226683 750 ntBASIC19.24■□□□□ 0.67
TraipQ8VIG6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TraipQ8VIG6 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TraipQ8VIG6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TraipQ8VIG6 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TraipQ8VIG6 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TraipQ8VIG6 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.24■□□□□ 0.67
TraipQ8VIG6 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms