Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpp40Q8R1F9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpp40Q8R1F9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpp40Q8R1F9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Rpp40Q8R1F9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpp40Q8R1F9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpp40Q8R1F9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpp40Q8R1F9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpp40Q8R1F9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Rpp40Q8R1F9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.43■□□□□ 0.7
Rpp40Q8R1F9 Gm18666-201ENSMUST00000190039 958 ntBASIC19.43■□□□□ 0.7
Rpp40Q8R1F9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpp40Q8R1F9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rpp40Q8R1F9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpp40Q8R1F9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
Rpp40Q8R1F9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpp40Q8R1F9 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.42■□□□□ 0.7
Rpp40Q8R1F9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rpp40Q8R1F9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpp40Q8R1F9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.42■□□□□ 0.7
Rpp40Q8R1F9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.42■□□□□ 0.7
Rpp40Q8R1F9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rpp40Q8R1F9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.42■□□□□ 0.7
Rpp40Q8R1F9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Rpp40Q8R1F9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpp40Q8R1F9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpp40Q8R1F9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rpp40Q8R1F9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Rpp40Q8R1F9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpp40Q8R1F9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpp40Q8R1F9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpp40Q8R1F9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Rpp40Q8R1F9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpp40Q8R1F9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Rpp40Q8R1F9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Rpp40Q8R1F9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.41■□□□□ 0.7
Rpp40Q8R1F9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpp40Q8R1F9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.41■□□□□ 0.7
Rpp40Q8R1F9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rpp40Q8R1F9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpp40Q8R1F9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.41■□□□□ 0.7
Rpp40Q8R1F9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpp40Q8R1F9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rpp40Q8R1F9 Tgds-204ENSMUST00000228543 1594 ntBASIC19.4■□□□□ 0.7
Rpp40Q8R1F9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpp40Q8R1F9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpp40Q8R1F9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpp40Q8R1F9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rpp40Q8R1F9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpp40Q8R1F9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rpp40Q8R1F9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rpp40Q8R1F9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rpp40Q8R1F9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rpp40Q8R1F9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rpp40Q8R1F9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpp40Q8R1F9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rpp40Q8R1F9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.4■□□□□ 0.7
Rpp40Q8R1F9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rpp40Q8R1F9 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.4■□□□□ 0.7
Rpp40Q8R1F9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpp40Q8R1F9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpp40Q8R1F9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rpp40Q8R1F9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rpp40Q8R1F9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.39■□□□□ 0.69
Rpp40Q8R1F9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.39■□□□□ 0.69
Rpp40Q8R1F9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.39■□□□□ 0.69
Rpp40Q8R1F9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.39■□□□□ 0.69
Rpp40Q8R1F9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rpp40Q8R1F9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpp40Q8R1F9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpp40Q8R1F9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpp40Q8R1F9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpp40Q8R1F9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpp40Q8R1F9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpp40Q8R1F9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpp40Q8R1F9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpp40Q8R1F9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpp40Q8R1F9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.38■□□□□ 0.69
Rpp40Q8R1F9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.38■□□□□ 0.69
Rpp40Q8R1F9 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.38■□□□□ 0.69
Rpp40Q8R1F9 Gm10698-201ENSMUST00000182663 604 ntBASIC19.38■□□□□ 0.69
Rpp40Q8R1F9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rpp40Q8R1F9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpp40Q8R1F9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpp40Q8R1F9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Rpp40Q8R1F9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpp40Q8R1F9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpp40Q8R1F9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpp40Q8R1F9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rpp40Q8R1F9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpp40Q8R1F9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpp40Q8R1F9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rpp40Q8R1F9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.37■□□□□ 0.69
Rpp40Q8R1F9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.37■□□□□ 0.69
Rpp40Q8R1F9 Gm10138-203ENSMUST00000206952 366 ntBASIC19.37■□□□□ 0.69
Rpp40Q8R1F9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rpp40Q8R1F9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpp40Q8R1F9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpp40Q8R1F9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpp40Q8R1F9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms