Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Gm13158-201ENSMUST00000122007 736 ntBASIC19.62■□□□□ 0.73
Trim68Q8K243 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim68Q8K243 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim68Q8K243 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.62■□□□□ 0.73
Trim68Q8K243 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim68Q8K243 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim68Q8K243 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim68Q8K243 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim68Q8K243 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim68Q8K243 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim68Q8K243 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Trim68Q8K243 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim68Q8K243 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim68Q8K243 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim68Q8K243 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim68Q8K243 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim68Q8K243 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim68Q8K243 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim68Q8K243 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim68Q8K243 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim68Q8K243 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.6■□□□□ 0.73
Trim68Q8K243 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim68Q8K243 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim68Q8K243 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim68Q8K243 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Trim68Q8K243 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.6■□□□□ 0.73
Trim68Q8K243 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim68Q8K243 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim68Q8K243 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim68Q8K243 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim68Q8K243 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Trim68Q8K243 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.59■□□□□ 0.73
Trim68Q8K243 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim68Q8K243 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.59■□□□□ 0.73
Trim68Q8K243 Mir5122-201ENSMUST00000175004 89 ntBASIC19.59■□□□□ 0.73
Trim68Q8K243 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim68Q8K243 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.59■□□□□ 0.73
Trim68Q8K243 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.59■□□□□ 0.73
Trim68Q8K243 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim68Q8K243 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim68Q8K243 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim68Q8K243 Gm5417-201ENSMUST00000079706 384 ntBASIC19.59■□□□□ 0.73
Trim68Q8K243 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim68Q8K243 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Trim68Q8K243 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim68Q8K243 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim68Q8K243 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim68Q8K243 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Trim68Q8K243 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.58■□□□□ 0.72
Trim68Q8K243 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim68Q8K243 Gm10231-201ENSMUST00000181584 441 ntBASIC19.58■□□□□ 0.72
Trim68Q8K243 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim68Q8K243 Gm10175-202ENSMUST00000208752 441 ntBASIC19.58■□□□□ 0.72
Trim68Q8K243 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim68Q8K243 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim68Q8K243 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim68Q8K243 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Trim68Q8K243 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim68Q8K243 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim68Q8K243 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Trim68Q8K243 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim68Q8K243 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim68Q8K243 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim68Q8K243 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim68Q8K243 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Trim68Q8K243 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim68Q8K243 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim68Q8K243 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim68Q8K243 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.57■□□□□ 0.72
Trim68Q8K243 Gm43799-201ENSMUST00000201845 579 ntBASIC19.57■□□□□ 0.72
Trim68Q8K243 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.57■□□□□ 0.72
Trim68Q8K243 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Trim68Q8K243 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.57■□□□□ 0.72
Trim68Q8K243 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim68Q8K243 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim68Q8K243 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Trim68Q8K243 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim68Q8K243 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Trim68Q8K243 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim68Q8K243 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim68Q8K243 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim68Q8K243 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Trim68Q8K243 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
Trim68Q8K243 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim68Q8K243 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim68Q8K243 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim68Q8K243 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.56■□□□□ 0.72
Trim68Q8K243 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim68Q8K243 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim68Q8K243 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim68Q8K243 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim68Q8K243 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim68Q8K243 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim68Q8K243 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim68Q8K243 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim68Q8K243 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Trim68Q8K243 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim68Q8K243 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim68Q8K243 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim68Q8K243 Gm6433-201ENSMUST00000118634 875 ntBASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms