Protein–RNA interactions for Protein: Q8C3X2

Ccdc90b, Coiled-coil domain-containing protein 90B, mitochondrial, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc90bQ8C3X2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc90bQ8C3X2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc90bQ8C3X2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc90bQ8C3X2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc90bQ8C3X2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.57■□□□□ 0.4
Ccdc90bQ8C3X2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc90bQ8C3X2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc90bQ8C3X2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc90bQ8C3X2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc90bQ8C3X2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc90bQ8C3X2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc90bQ8C3X2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc90bQ8C3X2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc90bQ8C3X2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc90bQ8C3X2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc90bQ8C3X2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.56■□□□□ 0.4
Ccdc90bQ8C3X2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc90bQ8C3X2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc90bQ8C3X2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ccdc90bQ8C3X2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc90bQ8C3X2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Ccdc90bQ8C3X2 Gm12922-201ENSMUST00000120626 809 ntBASIC17.56■□□□□ 0.4
Ccdc90bQ8C3X2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.56■□□□□ 0.4
Ccdc90bQ8C3X2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccdc90bQ8C3X2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ccdc90bQ8C3X2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc90bQ8C3X2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccdc90bQ8C3X2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc90bQ8C3X2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc90bQ8C3X2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc90bQ8C3X2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc90bQ8C3X2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Ccdc90bQ8C3X2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc90bQ8C3X2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc90bQ8C3X2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc90bQ8C3X2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc90bQ8C3X2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc90bQ8C3X2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc90bQ8C3X2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.55■□□□□ 0.4
Ccdc90bQ8C3X2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc90bQ8C3X2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.55■□□□□ 0.4
Ccdc90bQ8C3X2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc90bQ8C3X2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc90bQ8C3X2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc90bQ8C3X2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc90bQ8C3X2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc90bQ8C3X2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc90bQ8C3X2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.55■□□□□ 0.4
Ccdc90bQ8C3X2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.55■□□□□ 0.4
Ccdc90bQ8C3X2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ccdc90bQ8C3X2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc90bQ8C3X2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc90bQ8C3X2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc90bQ8C3X2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc90bQ8C3X2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc90bQ8C3X2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc90bQ8C3X2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc90bQ8C3X2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc90bQ8C3X2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc90bQ8C3X2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc90bQ8C3X2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc90bQ8C3X2 Gm45102-201ENSMUST00000207427 857 ntBASIC17.54■□□□□ 0.4
Ccdc90bQ8C3X2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.54■□□□□ 0.4
Ccdc90bQ8C3X2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc90bQ8C3X2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.54■□□□□ 0.4
Ccdc90bQ8C3X2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc90bQ8C3X2 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc90bQ8C3X2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc90bQ8C3X2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc90bQ8C3X2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc90bQ8C3X2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc90bQ8C3X2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc90bQ8C3X2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc90bQ8C3X2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc90bQ8C3X2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc90bQ8C3X2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc90bQ8C3X2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc90bQ8C3X2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc90bQ8C3X2 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.53■□□□□ 0.4
Ccdc90bQ8C3X2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc90bQ8C3X2 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.53■□□□□ 0.4
Ccdc90bQ8C3X2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc90bQ8C3X2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ccdc90bQ8C3X2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc90bQ8C3X2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc90bQ8C3X2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc90bQ8C3X2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc90bQ8C3X2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc90bQ8C3X2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc90bQ8C3X2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc90bQ8C3X2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc90bQ8C3X2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc90bQ8C3X2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.52■□□□□ 0.4
Ccdc90bQ8C3X2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc90bQ8C3X2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc90bQ8C3X2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc90bQ8C3X2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc90bQ8C3X2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc90bQ8C3X2 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.52■□□□□ 0.39
Ccdc90bQ8C3X2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms