Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sfr1Q8BP27 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sfr1Q8BP27 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sfr1Q8BP27 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sfr1Q8BP27 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sfr1Q8BP27 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sfr1Q8BP27 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sfr1Q8BP27 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Sfr1Q8BP27 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sfr1Q8BP27 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sfr1Q8BP27 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sfr1Q8BP27 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sfr1Q8BP27 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.39■□□□□ 0.53
Sfr1Q8BP27 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.39■□□□□ 0.53
Sfr1Q8BP27 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sfr1Q8BP27 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sfr1Q8BP27 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sfr1Q8BP27 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sfr1Q8BP27 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.39■□□□□ 0.53
Sfr1Q8BP27 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sfr1Q8BP27 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Sfr1Q8BP27 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sfr1Q8BP27 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sfr1Q8BP27 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Sfr1Q8BP27 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sfr1Q8BP27 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Sfr1Q8BP27 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sfr1Q8BP27 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sfr1Q8BP27 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sfr1Q8BP27 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sfr1Q8BP27 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sfr1Q8BP27 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sfr1Q8BP27 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sfr1Q8BP27 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sfr1Q8BP27 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sfr1Q8BP27 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sfr1Q8BP27 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sfr1Q8BP27 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sfr1Q8BP27 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sfr1Q8BP27 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.37■□□□□ 0.53
Sfr1Q8BP27 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.37■□□□□ 0.53
Sfr1Q8BP27 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sfr1Q8BP27 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sfr1Q8BP27 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sfr1Q8BP27 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sfr1Q8BP27 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sfr1Q8BP27 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sfr1Q8BP27 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sfr1Q8BP27 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Sfr1Q8BP27 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sfr1Q8BP27 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sfr1Q8BP27 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sfr1Q8BP27 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.36■□□□□ 0.53
Sfr1Q8BP27 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sfr1Q8BP27 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Sfr1Q8BP27 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.36■□□□□ 0.53
Sfr1Q8BP27 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sfr1Q8BP27 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.36■□□□□ 0.53
Sfr1Q8BP27 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Sfr1Q8BP27 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sfr1Q8BP27 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sfr1Q8BP27 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
Sfr1Q8BP27 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Sfr1Q8BP27 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sfr1Q8BP27 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sfr1Q8BP27 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Sfr1Q8BP27 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sfr1Q8BP27 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sfr1Q8BP27 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sfr1Q8BP27 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Sfr1Q8BP27 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Sfr1Q8BP27 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.35■□□□□ 0.53
Sfr1Q8BP27 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sfr1Q8BP27 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.35■□□□□ 0.53
Sfr1Q8BP27 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.35■□□□□ 0.53
Sfr1Q8BP27 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.35■□□□□ 0.53
Sfr1Q8BP27 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Sfr1Q8BP27 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Sfr1Q8BP27 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.35■□□□□ 0.53
Sfr1Q8BP27 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sfr1Q8BP27 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sfr1Q8BP27 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sfr1Q8BP27 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sfr1Q8BP27 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sfr1Q8BP27 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sfr1Q8BP27 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sfr1Q8BP27 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.34■□□□□ 0.53
Sfr1Q8BP27 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sfr1Q8BP27 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sfr1Q8BP27 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.34■□□□□ 0.53
Sfr1Q8BP27 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Sfr1Q8BP27 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sfr1Q8BP27 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sfr1Q8BP27 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Sfr1Q8BP27 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sfr1Q8BP27 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Sfr1Q8BP27 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Sfr1Q8BP27 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sfr1Q8BP27 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sfr1Q8BP27 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms