Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp1Q8BJQ2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.22■□□□□ 0.67
Usp1Q8BJQ2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp1Q8BJQ2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp1Q8BJQ2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp1Q8BJQ2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp1Q8BJQ2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp1Q8BJQ2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp1Q8BJQ2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Usp1Q8BJQ2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp1Q8BJQ2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Usp1Q8BJQ2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp1Q8BJQ2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.21■□□□□ 0.67
Usp1Q8BJQ2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Usp1Q8BJQ2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp1Q8BJQ2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp1Q8BJQ2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Usp1Q8BJQ2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp1Q8BJQ2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp1Q8BJQ2 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.2■□□□□ 0.66
Usp1Q8BJQ2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp1Q8BJQ2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp1Q8BJQ2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp1Q8BJQ2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.2■□□□□ 0.66
Usp1Q8BJQ2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.2■□□□□ 0.66
Usp1Q8BJQ2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp1Q8BJQ2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp1Q8BJQ2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.2■□□□□ 0.66
Usp1Q8BJQ2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.2■□□□□ 0.66
Usp1Q8BJQ2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp1Q8BJQ2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp1Q8BJQ2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp1Q8BJQ2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp1Q8BJQ2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Usp1Q8BJQ2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.19■□□□□ 0.66
Usp1Q8BJQ2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp1Q8BJQ2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Usp1Q8BJQ2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Usp1Q8BJQ2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Usp1Q8BJQ2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp1Q8BJQ2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Usp1Q8BJQ2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp1Q8BJQ2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp1Q8BJQ2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp1Q8BJQ2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp1Q8BJQ2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp1Q8BJQ2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp1Q8BJQ2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp1Q8BJQ2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp1Q8BJQ2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Usp1Q8BJQ2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.18■□□□□ 0.66
Usp1Q8BJQ2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Usp1Q8BJQ2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Usp1Q8BJQ2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Usp1Q8BJQ2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.18■□□□□ 0.66
Usp1Q8BJQ2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Usp1Q8BJQ2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Usp1Q8BJQ2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Usp1Q8BJQ2 Gm38285-201ENSMUST00000192928 922 ntBASIC19.18■□□□□ 0.66
Usp1Q8BJQ2 Mtag2-201ENSMUST00000058665 714 ntBASIC19.18■□□□□ 0.66
Usp1Q8BJQ2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.18■□□□□ 0.66
Usp1Q8BJQ2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp1Q8BJQ2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp1Q8BJQ2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp1Q8BJQ2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp1Q8BJQ2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp1Q8BJQ2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp1Q8BJQ2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp1Q8BJQ2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
Usp1Q8BJQ2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Usp1Q8BJQ2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Usp1Q8BJQ2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Usp1Q8BJQ2 Gm15375-201ENSMUST00000119510 849 ntBASIC19.17■□□□□ 0.66
Usp1Q8BJQ2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp1Q8BJQ2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp1Q8BJQ2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp1Q8BJQ2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Usp1Q8BJQ2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp1Q8BJQ2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Usp1Q8BJQ2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Usp1Q8BJQ2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp1Q8BJQ2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp1Q8BJQ2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp1Q8BJQ2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp1Q8BJQ2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Usp1Q8BJQ2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Usp1Q8BJQ2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.16■□□□□ 0.66
Usp1Q8BJQ2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.16■□□□□ 0.66
Usp1Q8BJQ2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp1Q8BJQ2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Usp1Q8BJQ2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp1Q8BJQ2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp1Q8BJQ2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp1Q8BJQ2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Usp1Q8BJQ2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp1Q8BJQ2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp1Q8BJQ2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp1Q8BJQ2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp1Q8BJQ2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp1Q8BJQ2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms