Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Upk3bQ80YF6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.35■□□□□ 0.05
Upk3bQ80YF6 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.35■□□□□ 0.05
Upk3bQ80YF6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Upk3bQ80YF6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.35■□□□□ 0.05
Upk3bQ80YF6 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Upk3bQ80YF6 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Upk3bQ80YF6 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Upk3bQ80YF6 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.35■□□□□ 0.05
Upk3bQ80YF6 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Upk3bQ80YF6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bQ80YF6 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bQ80YF6 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.34■□□□□ 0.05
Upk3bQ80YF6 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bQ80YF6 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bQ80YF6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bQ80YF6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
Upk3bQ80YF6 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.34■□□□□ 0.05
Upk3bQ80YF6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bQ80YF6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bQ80YF6 Gm26833-201ENSMUST00000180899 440 ntBASIC15.34■□□□□ 0.05
Upk3bQ80YF6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bQ80YF6 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.34■□□□□ 0.05
Upk3bQ80YF6 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bQ80YF6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bQ80YF6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Upk3bQ80YF6 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bQ80YF6 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bQ80YF6 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bQ80YF6 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bQ80YF6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bQ80YF6 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bQ80YF6 Gm43034-201ENSMUST00000198678 1364 ntBASIC15.34■□□□□ 0.05
Upk3bQ80YF6 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bQ80YF6 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bQ80YF6 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bQ80YF6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bQ80YF6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Upk3bQ80YF6 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.33■□□□□ 0.05
Upk3bQ80YF6 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Upk3bQ80YF6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Upk3bQ80YF6 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Upk3bQ80YF6 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Upk3bQ80YF6 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Upk3bQ80YF6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Upk3bQ80YF6 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.33■□□□□ 0.04
Upk3bQ80YF6 Gm8969-201ENSMUST00000199694 526 ntBASIC15.33■□□□□ 0.04
Upk3bQ80YF6 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.33■□□□□ 0.04
Upk3bQ80YF6 Gm40848-201ENSMUST00000221998 324 ntBASIC15.33■□□□□ 0.04
Upk3bQ80YF6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Upk3bQ80YF6 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Upk3bQ80YF6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Upk3bQ80YF6 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Upk3bQ80YF6 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Upk3bQ80YF6 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Upk3bQ80YF6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Upk3bQ80YF6 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Upk3bQ80YF6 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Upk3bQ80YF6 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Upk3bQ80YF6 Fst-202ENSMUST00000223640 2612 ntBASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Gm21956-201ENSMUST00000179946 522 ntBASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bQ80YF6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Upk3bQ80YF6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk3bQ80YF6 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk3bQ80YF6 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Upk3bQ80YF6 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Upk3bQ80YF6 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.31■□□□□ 0.04
Upk3bQ80YF6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk3bQ80YF6 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk3bQ80YF6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Upk3bQ80YF6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.31■□□□□ 0.04
Upk3bQ80YF6 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms