Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sdc3Q64519 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sdc3Q64519 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdc3Q64519 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdc3Q64519 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdc3Q64519 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.38■□□□□ 0.37
Sdc3Q64519 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sdc3Q64519 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdc3Q64519 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Sdc3Q64519 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdc3Q64519 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdc3Q64519 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Sdc3Q64519 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdc3Q64519 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sdc3Q64519 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Sdc3Q64519 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdc3Q64519 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sdc3Q64519 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdc3Q64519 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc3Q64519 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc3Q64519 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc3Q64519 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc3Q64519 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Sdc3Q64519 Gm22240-201ENSMUST00000175225 82 ntBASIC17.37■□□□□ 0.37
Sdc3Q64519 Gm44549-201ENSMUST00000208351 577 ntBASIC17.37■□□□□ 0.37
Sdc3Q64519 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc3Q64519 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc3Q64519 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc3Q64519 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc3Q64519 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc3Q64519 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc3Q64519 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc3Q64519 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc3Q64519 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc3Q64519 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc3Q64519 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc3Q64519 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.36■□□□□ 0.37
Sdc3Q64519 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc3Q64519 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc3Q64519 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc3Q64519 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc3Q64519 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc3Q64519 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Sdc3Q64519 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc3Q64519 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.36■□□□□ 0.37
Sdc3Q64519 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.36■□□□□ 0.37
Sdc3Q64519 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Sdc3Q64519 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc3Q64519 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc3Q64519 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc3Q64519 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc3Q64519 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Sdc3Q64519 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Sdc3Q64519 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sdc3Q64519 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sdc3Q64519 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sdc3Q64519 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sdc3Q64519 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sdc3Q64519 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sdc3Q64519 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sdc3Q64519 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sdc3Q64519 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sdc3Q64519 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sdc3Q64519 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.35■□□□□ 0.37
Sdc3Q64519 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sdc3Q64519 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.35■□□□□ 0.37
Sdc3Q64519 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sdc3Q64519 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.35■□□□□ 0.37
Sdc3Q64519 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sdc3Q64519 Gm2399-201ENSMUST00000104944 225 ntBASIC17.34■□□□□ 0.37
Sdc3Q64519 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.34■□□□□ 0.37
Sdc3Q64519 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sdc3Q64519 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.34■□□□□ 0.37
Sdc3Q64519 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.34■□□□□ 0.37
Sdc3Q64519 Gm8520-201ENSMUST00000186517 868 ntBASIC17.34■□□□□ 0.37
Sdc3Q64519 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sdc3Q64519 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sdc3Q64519 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sdc3Q64519 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Sdc3Q64519 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sdc3Q64519 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sdc3Q64519 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sdc3Q64519 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.34■□□□□ 0.37
Sdc3Q64519 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sdc3Q64519 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sdc3Q64519 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.37
Sdc3Q64519 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sdc3Q64519 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.33■□□□□ 0.37
Sdc3Q64519 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sdc3Q64519 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sdc3Q64519 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Sdc3Q64519 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Sdc3Q64519 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sdc3Q64519 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Sdc3Q64519 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.33■□□□□ 0.36
Sdc3Q64519 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sdc3Q64519 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sdc3Q64519 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sdc3Q64519 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sdc3Q64519 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms