Protein–RNA interactions for Protein: Q61909

Runx1t1, Protein CBFA2T1, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Runx1t1Q61909 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Runx1t1Q61909 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.33■□□□□ 0.36
Runx1t1Q61909 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
Runx1t1Q61909 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.33■□□□□ 0.36
Runx1t1Q61909 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.33■□□□□ 0.36
Runx1t1Q61909 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.33■□□□□ 0.36
Runx1t1Q61909 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Runx1t1Q61909 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Runx1t1Q61909 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Runx1t1Q61909 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Runx1t1Q61909 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Runx1t1Q61909 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Runx1t1Q61909 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Runx1t1Q61909 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Runx1t1Q61909 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Runx1t1Q61909 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.33■□□□□ 0.36
Runx1t1Q61909 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Runx1t1Q61909 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Runx1t1Q61909 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Runx1t1Q61909 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Runx1t1Q61909 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Runx1t1Q61909 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Runx1t1Q61909 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Runx1t1Q61909 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Runx1t1Q61909 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.32■□□□□ 0.36
Runx1t1Q61909 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.32■□□□□ 0.36
Runx1t1Q61909 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Runx1t1Q61909 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Runx1t1Q61909 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Runx1t1Q61909 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Runx1t1Q61909 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Runx1t1Q61909 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Runx1t1Q61909 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Runx1t1Q61909 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Runx1t1Q61909 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Runx1t1Q61909 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Runx1t1Q61909 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Runx1t1Q61909 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Runx1t1Q61909 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Runx1t1Q61909 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Runx1t1Q61909 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Runx1t1Q61909 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Runx1t1Q61909 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Runx1t1Q61909 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Runx1t1Q61909 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Runx1t1Q61909 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Runx1t1Q61909 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Runx1t1Q61909 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Runx1t1Q61909 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Runx1t1Q61909 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Runx1t1Q61909 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.3■□□□□ 0.36
Runx1t1Q61909 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Runx1t1Q61909 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Runx1t1Q61909 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Runx1t1Q61909 Gm13534-201ENSMUST00000121169 513 ntBASIC17.3■□□□□ 0.36
Runx1t1Q61909 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Runx1t1Q61909 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Runx1t1Q61909 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Runx1t1Q61909 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Runx1t1Q61909 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Runx1t1Q61909 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Runx1t1Q61909 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Runx1t1Q61909 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Runx1t1Q61909 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.29■□□□□ 0.36
Runx1t1Q61909 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Runx1t1Q61909 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Runx1t1Q61909 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Runx1t1Q61909 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Runx1t1Q61909 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Runx1t1Q61909 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Runx1t1Q61909 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Runx1t1Q61909 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.29■□□□□ 0.36
Runx1t1Q61909 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Runx1t1Q61909 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Runx1t1Q61909 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Runx1t1Q61909 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Runx1t1Q61909 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.29■□□□□ 0.36
Runx1t1Q61909 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.29■□□□□ 0.36
Runx1t1Q61909 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Runx1t1Q61909 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Runx1t1Q61909 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Runx1t1Q61909 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Runx1t1Q61909 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Runx1t1Q61909 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Runx1t1Q61909 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Runx1t1Q61909 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Runx1t1Q61909 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.29■□□□□ 0.36
Runx1t1Q61909 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Runx1t1Q61909 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Runx1t1Q61909 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Runx1t1Q61909 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Runx1t1Q61909 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Runx1t1Q61909 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Runx1t1Q61909 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Runx1t1Q61909 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.28■□□□□ 0.36
Runx1t1Q61909 Gm42778-201ENSMUST00000199644 553 ntBASIC17.28■□□□□ 0.36
Runx1t1Q61909 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Runx1t1Q61909 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.28■□□□□ 0.36
Runx1t1Q61909 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Runx1t1Q61909 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms