Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcd1Q61466 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcd1Q61466 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcd1Q61466 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Smarcd1Q61466 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Smarcd1Q61466 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Smarcd1Q61466 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcd1Q61466 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Smarcd1Q61466 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.89■□□□□ 0.61
Smarcd1Q61466 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.89■□□□□ 0.61
Smarcd1Q61466 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.89■□□□□ 0.61
Smarcd1Q61466 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Smarcd1Q61466 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcd1Q61466 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcd1Q61466 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcd1Q61466 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcd1Q61466 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.89■□□□□ 0.61
Smarcd1Q61466 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcd1Q61466 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcd1Q61466 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcd1Q61466 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcd1Q61466 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcd1Q61466 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcd1Q61466 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Smarcd1Q61466 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
Smarcd1Q61466 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcd1Q61466 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcd1Q61466 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcd1Q61466 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcd1Q61466 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcd1Q61466 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Smarcd1Q61466 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcd1Q61466 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Smarcd1Q61466 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.88■□□□□ 0.61
Smarcd1Q61466 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcd1Q61466 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.88■□□□□ 0.61
Smarcd1Q61466 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.88■□□□□ 0.61
Smarcd1Q61466 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcd1Q61466 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.88■□□□□ 0.61
Smarcd1Q61466 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcd1Q61466 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcd1Q61466 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcd1Q61466 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcd1Q61466 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcd1Q61466 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcd1Q61466 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.87■□□□□ 0.61
Smarcd1Q61466 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcd1Q61466 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.87■□□□□ 0.61
Smarcd1Q61466 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcd1Q61466 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
Smarcd1Q61466 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcd1Q61466 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcd1Q61466 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Smarcd1Q61466 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcd1Q61466 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcd1Q61466 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcd1Q61466 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.86■□□□□ 0.61
Smarcd1Q61466 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcd1Q61466 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Smarcd1Q61466 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.86■□□□□ 0.61
Smarcd1Q61466 Gm15378-201ENSMUST00000121894 207 ntBASIC18.86■□□□□ 0.61
Smarcd1Q61466 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcd1Q61466 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcd1Q61466 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcd1Q61466 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd1Q61466 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd1Q61466 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd1Q61466 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd1Q61466 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd1Q61466 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd1Q61466 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.85■□□□□ 0.61
Smarcd1Q61466 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd1Q61466 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd1Q61466 Gm10698-201ENSMUST00000182663 604 ntBASIC18.85■□□□□ 0.61
Smarcd1Q61466 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.85■□□□□ 0.61
Smarcd1Q61466 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd1Q61466 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd1Q61466 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd1Q61466 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd1Q61466 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd1Q61466 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd1Q61466 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd1Q61466 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcd1Q61466 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Smarcd1Q61466 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcd1Q61466 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcd1Q61466 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcd1Q61466 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Smarcd1Q61466 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Smarcd1Q61466 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcd1Q61466 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcd1Q61466 Gm15375-201ENSMUST00000119510 849 ntBASIC18.84■□□□□ 0.61
Smarcd1Q61466 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcd1Q61466 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcd1Q61466 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcd1Q61466 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcd1Q61466 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcd1Q61466 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcd1Q61466 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Smarcd1Q61466 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms