Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vsx2Q61412 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vsx2Q61412 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vsx2Q61412 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vsx2Q61412 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vsx2Q61412 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Vsx2Q61412 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Vsx2Q61412 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Vsx2Q61412 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vsx2Q61412 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vsx2Q61412 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.66■□□□□ 0.42
Vsx2Q61412 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.66■□□□□ 0.42
Vsx2Q61412 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.66■□□□□ 0.42
Vsx2Q61412 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Vsx2Q61412 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vsx2Q61412 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vsx2Q61412 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vsx2Q61412 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vsx2Q61412 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vsx2Q61412 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Vsx2Q61412 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vsx2Q61412 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Vsx2Q61412 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vsx2Q61412 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vsx2Q61412 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vsx2Q61412 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Vsx2Q61412 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vsx2Q61412 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vsx2Q61412 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vsx2Q61412 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vsx2Q61412 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.65■□□□□ 0.42
Vsx2Q61412 Gm5408-201ENSMUST00000197998 747 ntBASIC17.65■□□□□ 0.42
Vsx2Q61412 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vsx2Q61412 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.65■□□□□ 0.42
Vsx2Q61412 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vsx2Q61412 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vsx2Q61412 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.65■□□□□ 0.42
Vsx2Q61412 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Vsx2Q61412 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vsx2Q61412 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vsx2Q61412 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vsx2Q61412 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vsx2Q61412 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Vsx2Q61412 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Vsx2Q61412 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vsx2Q61412 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Vsx2Q61412 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.64■□□□□ 0.41
Vsx2Q61412 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Vsx2Q61412 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vsx2Q61412 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vsx2Q61412 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vsx2Q61412 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vsx2Q61412 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vsx2Q61412 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vsx2Q61412 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.64■□□□□ 0.41
Vsx2Q61412 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vsx2Q61412 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vsx2Q61412 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vsx2Q61412 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vsx2Q61412 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vsx2Q61412 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.63■□□□□ 0.41
Vsx2Q61412 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vsx2Q61412 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vsx2Q61412 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vsx2Q61412 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vsx2Q61412 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Vsx2Q61412 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vsx2Q61412 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vsx2Q61412 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vsx2Q61412 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Vsx2Q61412 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vsx2Q61412 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vsx2Q61412 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vsx2Q61412 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.62■□□□□ 0.41
Vsx2Q61412 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.62■□□□□ 0.41
Vsx2Q61412 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vsx2Q61412 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vsx2Q61412 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.62■□□□□ 0.41
Vsx2Q61412 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vsx2Q61412 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vsx2Q61412 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vsx2Q61412 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vsx2Q61412 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Vsx2Q61412 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Vsx2Q61412 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vsx2Q61412 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vsx2Q61412 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vsx2Q61412 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Vsx2Q61412 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vsx2Q61412 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vsx2Q61412 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Vsx2Q61412 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Vsx2Q61412 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.61■□□□□ 0.41
Vsx2Q61412 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vsx2Q61412 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.61■□□□□ 0.41
Vsx2Q61412 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.61■□□□□ 0.41
Vsx2Q61412 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.61■□□□□ 0.41
Vsx2Q61412 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vsx2Q61412 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Vsx2Q61412 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms