Protein–RNA interactions for Protein: Q61056

Trpc1, Short transient receptor potential channel 1, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpc1Q61056 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trpc1Q61056 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trpc1Q61056 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trpc1Q61056 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.65■□□□□ 0.42
Trpc1Q61056 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trpc1Q61056 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trpc1Q61056 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trpc1Q61056 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trpc1Q61056 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trpc1Q61056 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Trpc1Q61056 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trpc1Q61056 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trpc1Q61056 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Trpc1Q61056 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trpc1Q61056 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trpc1Q61056 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trpc1Q61056 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trpc1Q61056 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trpc1Q61056 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trpc1Q61056 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trpc1Q61056 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trpc1Q61056 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trpc1Q61056 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trpc1Q61056 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trpc1Q61056 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trpc1Q61056 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trpc1Q61056 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trpc1Q61056 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trpc1Q61056 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trpc1Q61056 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.63■□□□□ 0.41
Trpc1Q61056 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trpc1Q61056 Gm10493-201ENSMUST00000097270 612 ntBASIC17.63■□□□□ 0.41
Trpc1Q61056 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trpc1Q61056 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trpc1Q61056 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trpc1Q61056 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trpc1Q61056 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trpc1Q61056 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trpc1Q61056 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trpc1Q61056 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trpc1Q61056 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.63■□□□□ 0.41
Trpc1Q61056 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trpc1Q61056 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trpc1Q61056 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trpc1Q61056 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trpc1Q61056 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trpc1Q61056 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.62■□□□□ 0.41
Trpc1Q61056 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.62■□□□□ 0.41
Trpc1Q61056 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
Trpc1Q61056 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.62■□□□□ 0.41
Trpc1Q61056 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trpc1Q61056 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trpc1Q61056 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trpc1Q61056 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trpc1Q61056 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trpc1Q61056 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trpc1Q61056 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trpc1Q61056 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trpc1Q61056 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.61■□□□□ 0.41
Trpc1Q61056 Haglr-201ENSMUST00000100000 2085 ntBASIC17.61■□□□□ 0.41
Trpc1Q61056 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trpc1Q61056 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.61■□□□□ 0.41
Trpc1Q61056 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Trpc1Q61056 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.61■□□□□ 0.41
Trpc1Q61056 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.61■□□□□ 0.41
Trpc1Q61056 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.61■□□□□ 0.41
Trpc1Q61056 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trpc1Q61056 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trpc1Q61056 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trpc1Q61056 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.61■□□□□ 0.41
Trpc1Q61056 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trpc1Q61056 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trpc1Q61056 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.61■□□□□ 0.41
Trpc1Q61056 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trpc1Q61056 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.61■□□□□ 0.41
Trpc1Q61056 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trpc1Q61056 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trpc1Q61056 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Trpc1Q61056 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.6■□□□□ 0.41
Trpc1Q61056 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trpc1Q61056 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trpc1Q61056 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trpc1Q61056 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.6■□□□□ 0.41
Trpc1Q61056 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trpc1Q61056 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.6■□□□□ 0.41
Trpc1Q61056 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trpc1Q61056 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.6■□□□□ 0.41
Trpc1Q61056 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trpc1Q61056 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trpc1Q61056 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trpc1Q61056 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trpc1Q61056 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trpc1Q61056 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trpc1Q61056 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trpc1Q61056 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trpc1Q61056 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Trpc1Q61056 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trpc1Q61056 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trpc1Q61056 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trpc1Q61056 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms