Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ripk1Q60855 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ripk1Q60855 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ripk1Q60855 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ripk1Q60855 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.11■□□□□ 0.33
Ripk1Q60855 Gm42569-201ENSMUST00000200539 472 ntBASIC17.11■□□□□ 0.33
Ripk1Q60855 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ripk1Q60855 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.11■□□□□ 0.33
Ripk1Q60855 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.11■□□□□ 0.33
Ripk1Q60855 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ripk1Q60855 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.11■□□□□ 0.33
Ripk1Q60855 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ripk1Q60855 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ripk1Q60855 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ripk1Q60855 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk1Q60855 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Ripk1Q60855 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk1Q60855 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk1Q60855 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk1Q60855 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk1Q60855 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
Ripk1Q60855 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk1Q60855 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.1■□□□□ 0.33
Ripk1Q60855 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk1Q60855 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk1Q60855 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk1Q60855 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk1Q60855 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Ripk1Q60855 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk1Q60855 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk1Q60855 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ripk1Q60855 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ripk1Q60855 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk1Q60855 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk1Q60855 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk1Q60855 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk1Q60855 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk1Q60855 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.09■□□□□ 0.33
Ripk1Q60855 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk1Q60855 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk1Q60855 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk1Q60855 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk1Q60855 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk1Q60855 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk1Q60855 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ripk1Q60855 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.09■□□□□ 0.33
Ripk1Q60855 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Ripk1Q60855 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ripk1Q60855 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ripk1Q60855 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ripk1Q60855 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.08■□□□□ 0.33
Ripk1Q60855 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.08■□□□□ 0.32
Ripk1Q60855 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ripk1Q60855 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ripk1Q60855 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ripk1Q60855 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.08■□□□□ 0.32
Ripk1Q60855 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.08■□□□□ 0.32
Ripk1Q60855 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ripk1Q60855 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ripk1Q60855 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ripk1Q60855 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ripk1Q60855 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ripk1Q60855 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ripk1Q60855 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ripk1Q60855 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ripk1Q60855 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ripk1Q60855 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.07■□□□□ 0.32
Ripk1Q60855 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.07■□□□□ 0.32
Ripk1Q60855 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ripk1Q60855 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ripk1Q60855 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ripk1Q60855 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ripk1Q60855 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ripk1Q60855 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ripk1Q60855 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.06■□□□□ 0.32
Ripk1Q60855 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.06■□□□□ 0.32
Ripk1Q60855 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ripk1Q60855 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ripk1Q60855 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ripk1Q60855 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ripk1Q60855 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ripk1Q60855 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ripk1Q60855 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ripk1Q60855 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.06■□□□□ 0.32
Ripk1Q60855 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ripk1Q60855 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ripk1Q60855 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ripk1Q60855 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ripk1Q60855 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ripk1Q60855 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ripk1Q60855 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ripk1Q60855 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ripk1Q60855 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ripk1Q60855 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ripk1Q60855 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ripk1Q60855 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ripk1Q60855 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ripk1Q60855 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ripk1Q60855 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ripk1Q60855 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms