Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Tnfaip3Q60769 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tnfaip3Q60769 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tnfaip3Q60769 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tnfaip3Q60769 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Tnfaip3Q60769 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.02■□□□□ 0.32
Tnfaip3Q60769 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tnfaip3Q60769 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tnfaip3Q60769 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tnfaip3Q60769 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tnfaip3Q60769 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tnfaip3Q60769 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tnfaip3Q60769 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfaip3Q60769 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfaip3Q60769 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfaip3Q60769 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfaip3Q60769 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Tnfaip3Q60769 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.01■□□□□ 0.31
Tnfaip3Q60769 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfaip3Q60769 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfaip3Q60769 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfaip3Q60769 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfaip3Q60769 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfaip3Q60769 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfaip3Q60769 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfaip3Q60769 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfaip3Q60769 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Tnfaip3Q60769 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.01■□□□□ 0.31
Tnfaip3Q60769 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfaip3Q60769 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfaip3Q60769 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfaip3Q60769 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfaip3Q60769 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfaip3Q60769 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfaip3Q60769 Gm11927-201ENSMUST00000118472 759 ntBASIC17■□□□□ 0.31
Tnfaip3Q60769 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Tnfaip3Q60769 Gm18666-201ENSMUST00000190039 958 ntBASIC17■□□□□ 0.31
Tnfaip3Q60769 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17■□□□□ 0.31
Tnfaip3Q60769 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfaip3Q60769 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfaip3Q60769 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfaip3Q60769 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfaip3Q60769 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfaip3Q60769 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfaip3Q60769 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfaip3Q60769 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfaip3Q60769 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfaip3Q60769 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.99■□□□□ 0.31
Tnfaip3Q60769 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfaip3Q60769 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfaip3Q60769 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.99■□□□□ 0.31
Tnfaip3Q60769 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Tnfaip3Q60769 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfaip3Q60769 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Tnfaip3Q60769 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Tnfaip3Q60769 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfaip3Q60769 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfaip3Q60769 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfaip3Q60769 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfaip3Q60769 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfaip3Q60769 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfaip3Q60769 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfaip3Q60769 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfaip3Q60769 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.98■□□□□ 0.31
Tnfaip3Q60769 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfaip3Q60769 Gm5643-201ENSMUST00000117081 966 ntBASIC16.98■□□□□ 0.31
Tnfaip3Q60769 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfaip3Q60769 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfaip3Q60769 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfaip3Q60769 Zfp783-201ENSMUST00000095946 670 ntBASIC16.98■□□□□ 0.31
Tnfaip3Q60769 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.98■□□□□ 0.31
Tnfaip3Q60769 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfaip3Q60769 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfaip3Q60769 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfaip3Q60769 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Tnfaip3Q60769 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.97■□□□□ 0.31
Tnfaip3Q60769 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfaip3Q60769 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfaip3Q60769 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Tnfaip3Q60769 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfaip3Q60769 Gm13158-201ENSMUST00000122007 736 ntBASIC16.97■□□□□ 0.31
Tnfaip3Q60769 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfaip3Q60769 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.97■□□□□ 0.31
Tnfaip3Q60769 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfaip3Q60769 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfaip3Q60769 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfaip3Q60769 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Tnfaip3Q60769 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfaip3Q60769 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.97■□□□□ 0.31
Tnfaip3Q60769 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfaip3Q60769 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfaip3Q60769 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Tnfaip3Q60769 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfaip3Q60769 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfaip3Q60769 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfaip3Q60769 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfaip3Q60769 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfaip3Q60769 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfaip3Q60769 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfaip3Q60769 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms