Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-3Q5R1C3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-3Q5R1C3 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav3-3Q5R1C3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-3Q5R1C3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-3Q5R1C3 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav3-3Q5R1C3 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-3Q5R1C3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-3Q5R1C3 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-3Q5R1C3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-3Q5R1C3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-3Q5R1C3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav3-3Q5R1C3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-3Q5R1C3 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.62□□□□□ -0.23
Trav3-3Q5R1C3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-3Q5R1C3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav3-3Q5R1C3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-3Q5R1C3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav3-3Q5R1C3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trav3-3Q5R1C3 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-3Q5R1C3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-3Q5R1C3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-3Q5R1C3 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav3-3Q5R1C3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-3Q5R1C3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-3Q5R1C3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-3Q5R1C3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-3Q5R1C3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-3Q5R1C3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav3-3Q5R1C3 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-3Q5R1C3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-3Q5R1C3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-3Q5R1C3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-3Q5R1C3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-3Q5R1C3 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-3Q5R1C3 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.61□□□□□ -0.23
Trav3-3Q5R1C3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-3Q5R1C3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav3-3Q5R1C3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC13.61□□□□□ -0.23
Trav3-3Q5R1C3 Gm8969-201ENSMUST00000199694 526 ntBASIC13.61□□□□□ -0.23
Trav3-3Q5R1C3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-3Q5R1C3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-3Q5R1C3 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-3Q5R1C3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-3Q5R1C3 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Trav3-3Q5R1C3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-3Q5R1C3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-3Q5R1C3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav3-3Q5R1C3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-3Q5R1C3 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-3Q5R1C3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav3-3Q5R1C3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-3Q5R1C3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-3Q5R1C3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav3-3Q5R1C3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-3Q5R1C3 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.6□□□□□ -0.23
Trav3-3Q5R1C3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-3Q5R1C3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-3Q5R1C3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav3-3Q5R1C3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-3Q5R1C3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-3Q5R1C3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-3Q5R1C3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-3Q5R1C3 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-3Q5R1C3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-3Q5R1C3 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-3Q5R1C3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-3Q5R1C3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-3Q5R1C3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-3Q5R1C3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-3Q5R1C3 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav3-3Q5R1C3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3-3Q5R1C3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav3-3Q5R1C3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3-3Q5R1C3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Trav3-3Q5R1C3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Trav3-3Q5R1C3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3-3Q5R1C3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav3-3Q5R1C3 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav3-3Q5R1C3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3-3Q5R1C3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3-3Q5R1C3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3-3Q5R1C3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3-3Q5R1C3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3-3Q5R1C3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.23
Trav3-3Q5R1C3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav3-3Q5R1C3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3-3Q5R1C3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3-3Q5R1C3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3-3Q5R1C3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3-3Q5R1C3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3-3Q5R1C3 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3-3Q5R1C3 Gm42501-201ENSMUST00000200220 1026 ntBASIC13.58□□□□□ -0.24
Trav3-3Q5R1C3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3-3Q5R1C3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3-3Q5R1C3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3-3Q5R1C3 Gm45640-201ENSMUST00000210665 1896 ntBASIC13.58□□□□□ -0.24
Trav3-3Q5R1C3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3-3Q5R1C3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3-3Q5R1C3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms