Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Trim41Q5NCC3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Trim41Q5NCC3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
Trim41Q5NCC3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
Trim41Q5NCC3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Trim41Q5NCC3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC31.53■■■□□ 2.64
Trim41Q5NCC3 Gm15853-202ENSMUST00000195518 2041 ntBASIC31.53■■■□□ 2.64
Trim41Q5NCC3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Trim41Q5NCC3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Trim41Q5NCC3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Trim41Q5NCC3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
Trim41Q5NCC3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Trim41Q5NCC3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
Trim41Q5NCC3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Trim41Q5NCC3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Trim41Q5NCC3 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC31.52■■■□□ 2.64
Trim41Q5NCC3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Trim41Q5NCC3 Mir6349-201ENSMUST00000184059 97 ntBASIC31.52■■■□□ 2.64
Trim41Q5NCC3 Gm37292-201ENSMUST00000192062 758 ntBASIC31.52■■■□□ 2.64
Trim41Q5NCC3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC31.52■■■□□ 2.64
Trim41Q5NCC3 Gm43514-201ENSMUST00000198852 424 ntBASIC31.52■■■□□ 2.64
Trim41Q5NCC3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Trim41Q5NCC3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
Trim41Q5NCC3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Trim41Q5NCC3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Trim41Q5NCC3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC31.51■■■□□ 2.64
Trim41Q5NCC3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Trim41Q5NCC3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.64
Trim41Q5NCC3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Trim41Q5NCC3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC31.51■■■□□ 2.63
Trim41Q5NCC3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC31.51■■■□□ 2.63
Trim41Q5NCC3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
Trim41Q5NCC3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC31.51■■■□□ 2.63
Trim41Q5NCC3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC31.51■■■□□ 2.63
Trim41Q5NCC3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Trim41Q5NCC3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Trim41Q5NCC3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
Trim41Q5NCC3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Trim41Q5NCC3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Trim41Q5NCC3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Trim41Q5NCC3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Trim41Q5NCC3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
Trim41Q5NCC3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Trim41Q5NCC3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Trim41Q5NCC3 Gm44544-201ENSMUST00000207052 1844 ntBASIC31.49■■■□□ 2.63
Trim41Q5NCC3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Trim41Q5NCC3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
Trim41Q5NCC3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Trim41Q5NCC3 Gm21814-202ENSMUST00000203277 873 ntBASIC31.49■■■□□ 2.63
Trim41Q5NCC3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Trim41Q5NCC3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Trim41Q5NCC3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Trim41Q5NCC3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
Trim41Q5NCC3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
Trim41Q5NCC3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Trim41Q5NCC3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC31.48■■■□□ 2.63
Trim41Q5NCC3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC31.48■■■□□ 2.63
Trim41Q5NCC3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Trim41Q5NCC3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Trim41Q5NCC3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Trim41Q5NCC3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Trim41Q5NCC3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC31.47■■■□□ 2.63
Trim41Q5NCC3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC31.47■■■□□ 2.63
Trim41Q5NCC3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Trim41Q5NCC3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC31.47■■■□□ 2.63
Trim41Q5NCC3 Gm43545-201ENSMUST00000196765 2779 ntBASIC31.47■■■□□ 2.63
Trim41Q5NCC3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Trim41Q5NCC3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Trim41Q5NCC3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
Trim41Q5NCC3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC31.46■■■□□ 2.63
Trim41Q5NCC3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
Trim41Q5NCC3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
Trim41Q5NCC3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Trim41Q5NCC3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.63
Trim41Q5NCC3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC31.45■■■□□ 2.63
Trim41Q5NCC3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Trim41Q5NCC3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.62
Trim41Q5NCC3 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Trim41Q5NCC3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
Trim41Q5NCC3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
Trim41Q5NCC3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Trim41Q5NCC3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Trim41Q5NCC3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Trim41Q5NCC3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Trim41Q5NCC3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC31.44■■■□□ 2.62
Trim41Q5NCC3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Trim41Q5NCC3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC31.44■■■□□ 2.62
Trim41Q5NCC3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC31.44■■■□□ 2.62
Trim41Q5NCC3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
Trim41Q5NCC3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC31.43■■■□□ 2.62
Trim41Q5NCC3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Trim41Q5NCC3 Gm16042-201ENSMUST00000204813 1247 ntBASIC31.43■■■□□ 2.62
Trim41Q5NCC3 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC31.43■■■□□ 2.62
Trim41Q5NCC3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC31.43■■■□□ 2.62
Trim41Q5NCC3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Trim41Q5NCC3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Trim41Q5NCC3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Trim41Q5NCC3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Trim41Q5NCC3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Trim41Q5NCC3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms